Rhizobium indigoferae: U5G49_003439
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Entry
U5G49_003439 CDS
T09660
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rif03009
]
U5G49_003439
Enzymes [BR:
rif01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
U5G49_003439
Ribosome biogenesis [BR:
rif03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
U5G49_003439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
BON
Motif
Other DBs
NCBI-ProteinID:
WQN38284
UniProt:
A0ABZ0ZIM0
LinkDB
All DBs
Position
3434510..3435535
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AA seq
341 aa
AA seq
DB search
MSDPFKQAAGNRKVLTADESAEGRLDAWLTAQVGEEFSRSRIKTLIKDGQVFLRGQPVTD
PQRKVRTGDSFEITLPEPEDPTPQGEDIPLDILHEDDDVIVISKPSGLVVHPGPGNWTGT
LVNALIHHCSDTLSGIGGVRRPGIVHRLDKDTTGVMVVAKNDIAHRHLSLQFADHGRTMP
LERAYQAVVWGRPRTLSGTVDAPLGRATGDRTRRAVKRPDSQDADEAITHYQVIERFHEK
PDATAFASLVECRLETGRTHQIRVHMAHIGHPLLGDTVYGAGFKTKANLLPEEIRKVVNG
FGRQALHAFMLQFEHPRTGEIMHFEVPLPDDMVELVEALRR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacccctttaaacaagccgccggcaatagaaaagtcctgaccgccgatgaaagc
gccgaaggccggctcgacgcctggctgacggcgcaggtcggcgaggaattttcgcgcagc
cgcatcaagacgctgatcaaggatggccaggtttttctgcgcggccaacccgtcaccgac
ccgcaacgcaaggtgcgcaccggcgatagtttcgagatcacgctgcccgagccggaagac
ccgacgccgcagggcgaggacatcccgcttgatatcctccatgaggacgacgacgtcatc
gtcatttccaagccttccggcctcgtcgtccatcccggccccggcaactggacggggacg
ctggtcaacgcgctgatccaccattgcagcgatacactctccggcatcggcggtgtgcgc
cgccccggcatcgtccaccgcctcgacaaggacacgacaggcgtcatggtcgtcgccaag
aacgatattgcccatcgccacctctcgctgcaatttgccgaccacggccgcaccatgccg
ctggagcgggcctaccaggcagtcgtctggggccggccccgcacgctgtctggcacagtc
gacgcgccgcttggccgcgccaccggcgaccgcacgcgccgcgccgtcaaacgtcctgac
agtcaggacgccgacgaggcgatcacgcattaccaggtgatcgagcgcttccatgagaag
ccggacgcgaccgcgttcgcctcgctggtcgagtgccgcctcgaaaccggccgcacccac
cagatccgtgtccacatggcccatatcggccatccgctgctcggcgatacggtttacggc
gccggcttcaagaccaaggccaatcttctgcccgaagagatccgcaaggtcgtcaacggt
ttcggccgtcaggcgctgcatgccttcatgctgcaattcgagcatccccgcaccggcgaa
atcatgcatttcgaggtgccgctgccagatgatatggtcgaattggtcgaggcgctgcgg
cgataa
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