KEGG   Rhizobium indigoferae: U5G49_003440
Entry
U5G49_003440      CDS       T09660                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
rif  Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:rif00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rif03021]
    U5G49_003440 (rpoH)
Transcription machinery [BR:rif03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     U5G49_003440 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_11 Sigma70_r4_2 Sigma70_r3 IF2_N
Other DBs
NCBI-ProteinID: WQN38285
LinkDB
Position
3435723..3436631
AA seq 302 aa
MARNTLPSITAGEAGLNRYLDEIRKFPMLEPQQEYMLAKRYAEHGDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDAERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVSEIATKLNVSEEEVISMNRRL
SGDASLNAPIKAAEGDSGQWQDWLVDDHDSQEDVLIEQDELDTRRRMLAKAMSVLNERER
RIFEARRLAEDPVTLEDLSTEFDISRERVRQIEVRAFEKVQDAVRKEALERAKAVRVVEA
TA
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcccgaaataccttgccgtccattaccgccggtgaagccggtctcaatcgttacctc
gacgaaatccgcaagttcccgatgctggagccgcagcaggaatacatgctcgccaagcgt
tatgccgagcatggtgaccgggacgccgcccacaagctcgtcaccagccatcttcgcctc
gtcgcgaagatcgcgatgggttatcgcggctacggcctgccgatcggcgaagtcgtctcc
gagggcaatgtcggcctgatgcaggccgtcaagaaattcgatgccgagcgcggcttccgc
ctcgccacctatgccatgtggtggatcaaggcctcgatccaggaatatatcctgcgctcg
tggtcgctggtgaagatgggcacgaccgccaaccagaagcgcctgttcttcaacctgcgc
cggctgaagggccgcatccaggcaatcgatgacggcgacctgaagccggagcacgtatcg
gaaattgccaccaagctgaacgtctcggaggaggaggtcatttcgatgaaccgccgcctc
tccggcgacgcctcgctgaacgcaccgatcaaggcagccgaaggtgacagcggccaatgg
caggattggctggtggacgaccatgacagccaggaagacgtgctgatcgaacaggatgag
ctcgacacccgccggcgcatgctggcgaaagcgatgagcgtgctgaacgagcgcgaacgc
cgcatcttcgaggctcgccgtctcgccgaggatccagtgaccctggaagacctttcgacc
gaattcgacatcagccgcgaacgcgtgcgccagatcgaggtccgcgccttcgaaaaggtg
caggacgcggtccgcaaggaagccctggaacgcgccaaggccgtccgcgtcgtcgaagcc
acggcataa

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