KEGG   Rhizobium indigoferae: U5G49_003534
Entry
U5G49_003534      CDS       T09660                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
rif  Rhizobium indigoferae
Pathway
rif02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rif00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    U5G49_003534
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rif02022]
    U5G49_003534
Two-component system [BR:rif02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   U5G49_003534
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 HTH_50 AAA_2 AAA_5 FleQ AAA_16 TadZ_N AAA AAA_22 AAA_3
Other DBs
NCBI-ProteinID: WQN38370
LinkDB
Position
complement(3546868..3548202)
AA seq 444 aa
MNDAKILLVDDEEELRRSTAQALELSGFNVETYSNGDHVLELIGYSFPGVVVSDIRMPGI
DGMTLMQKIRELDPEVPVILVTGHGDVQLAVKAMREGAYDFIEKPFTPEMLAGVIRRAME
RRGLVLENRLLKAVAGKRDDIEARLPGRTQVMVDLRYRIRAIGASDADTLIVGETGAGKE
VVARALHDISARASRPFIAINCAALPANLIESELFGHEVGAFPGAVRPRYGKFEHGRGGT
ILLDEIGSMPFDLQAKFLRVLQERVISRLGSNEVVALDVRFIATSKVDLEAEVAAGRFRA
DLFYRLNVATLHVPSLSQRRADVPLLFLQLVREAAARYGRDEMAVPPDVISDIAQRDWPG
NVRELRNAADRLVLGLDNGGRQAEEATGLAERVAEFERGVIASALVAHGGSLRPVYESLG
ISRKTLYEKMQKYGLDKRMLTTES
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgaacgatgcgaagatcctgctggtcgacgacgaggaggaactgcgccgctcgacggcg
caggcgctggagctctccggcttcaacgtcgagacctattctaacggcgaccacgtgctg
gagctgatcggctacagctttcccggcgtcgtcgtcagtgacatccgcatgccgggcatc
gacggcatgacgctgatgcagaagatccgtgagctcgatccggaggtgccggtcattctc
gtcaccgggcacggcgatgtgcagcttgcggtgaaggcgatgcgcgaaggcgcctatgat
ttcatcgagaagccgttcacgcccgagatgctcgccggcgtcatccgccgggcgatggag
cggcgcggcctcgtgctcgaaaaccggctgttgaaagcggtcgccggcaagcgcgacgat
atcgaggcgcggctgccggggcgcacgcaggtgatggtggatttgcgctaccgcatccgg
gcgatcggggcgagcgatgccgatacgcttatcgtcggagaaacgggtgcgggcaaggag
gtggtggcgcgtgcgctccatgacatcagcgcccgggcgagccggccgttcattgcgatc
aattgcgccgcactgccggcaaacctgatcgagagcgagcttttcggccatgaggtgggg
gcctttccgggtgcggtgaggccacgttacggaaaattcgaacatggacgcggcggcacg
atcctgctcgacgagatcggctccatgcccttcgacctgcaggcgaagtttctgcgggtg
ctgcaggaacgggtaatctcacggctcggatcgaacgaagtggtggcgctggacgtgcgc
ttcatcgcgacgagcaaggtcgatctggaggcggaggtggcggcggggcgtttccgcgcc
gacctcttctatcggctgaatgtcgcgacgctgcatgtgccgtcgctgtcgcagcggcgg
gcggatgttccgctgcttttcctgcagctggtgcgggaggcggcggcacgctacggccgc
gacgagatggccgtgccgccggacgtgatttccgacattgctcagcgcgactggcccggc
aatgtgcgtgaattgaggaacgccgcagaccgtctggtcctcggtctcgacaatggcggg
cgccaagccgaggaggcgaccgggcttgctgagcgtgtcgccgaattcgaacgaggagtc
attgccagcgcgctggtggcccatggcggcagccttaggccggtctatgagtcgctcggc
atttcccggaagaccctctacgaaaagatgcagaaatatggtctcgacaagcggatgctg
accaccgaaagttag

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