Rhizobium indigoferae: U5G49_003775
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Entry
U5G49_003775 CDS
T09660
Symbol
odc2
Name
(GenBank) ornithine/lysine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00330
Arginine and proline metabolism
rif00480
Glutathione metabolism
rif01100
Metabolic pathways
rif01110
Biosynthesis of secondary metabolites
rif04148
Efferocytosis
Module
rif_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
U5G49_003775 (odc2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
U5G49_003775 (odc2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
U5G49_003775 (odc2)
Enzymes [BR:
rif01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
U5G49_003775 (odc2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WQN38605
UniProt:
A0ABZ0ZJ03
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All DBs
Position
complement(3806427..3807560)
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AA seq
377 aa
AA seq
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MTTQRIRDFLATRRPDGPCLVVDLDVVRDNFHAFRHAMPDSAIYYAVKANPAPEVLKLLA
GLGSNFDCASVAEIEMALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEK
ISRAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLQSYGVSFHVGSQ
MTKVDAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALR
THFGNQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDE
AIRYPIRTDHDGDEMEPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTT
YSAVAFNGFDPLKAYII
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagcgcatccgcgactttctcgcaacccgacgtcccgatggtccctgcctt
gtggttgacctcgacgtcgttcgcgacaatttccacgccttccgtcacgctatgccggac
agcgccatctattacgccgtgaaggccaacccggctccggaagtgctcaagctgctcgca
ggcctcggctccaatttcgattgcgcatccgttgccgaaatcgaaatggcgctcgaagcc
ggtgcgaccgccgcccgtatctcctacggcaacacgatcaagaaggaacgtgacgttgcc
cgcgcgcatgcgctcggcgtcagcctctttgcggtcgacagccacgaggaagtcgagaag
atctcgcgcgccgctcccggcgcccgtgtcttctgccgtgtgctcacggatggtgaaggc
gctgaatggccgctgtcgcgcaagttcggctgcgtcccgcagatggctgtcgacgttctc
gtctacgcccatcagcttggcctgcagtcctatggcgtctcgttccatgtcggttcgcag
atgaccaaggtcgatgcctgggattcggcactcgccgatgccaagcgcgtctttgtatcg
cttgccaagcagggcatccacctgcagatggtcaacatgggcggcggcttcccgaccaag
tacctgcgtgacgttccgtccgcagaagcttacggcaagtcgatctaccaggcgctgcgc
acgcattttggcaaccagatcccgcagacgatcatcgagccgggccgcggcatggtcggc
aatgccggtgtgatcaaggcggaagtcgtgctgatttcgaagaagtcggacaatgacgat
gcccgttgggtattcctcgacatcggcaaattcggcggtctcgccgagacgatggacgaa
gccatccgctatccgatccgcacggatcacgacggcgacgagatggagccctgcgtcatc
gccggcccgacctgcgattcggcagacgtgctctacgagaagaacctctatccgctgccg
atctccctttcgatcggcgacgaggtcctgatcgaaggcaccggcgcctatacgacgacc
tattcggcggtcgctttcaacggtttcgatccgctgaaggcctacatcatctaa
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