Rhizobium indigoferae: U5G49_003795
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Entry
U5G49_003795 CDS
T09660
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rif03000
]
U5G49_003795
Transcription factors [BR:
rif03000
]
Prokaryotic type
Helix-turn-helix
LacI family
U5G49_003795
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
WQN38625
LinkDB
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Position
3827578..3828609
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AA seq
343 aa
AA seq
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MSNSTPATIEDVARIAEVSIATVSRAIHMPEKVANSTRLKVNQAIAITGYTTNAMARSLR
LGRSNMILVVAPDIGDPNFSNILVGLENEARAHGYGILIGHTQNDAQRGLEYLKFFNSNQ
AAGLILFTGILPFGHQTMTARLPPSVGVFEPVFNGGIPYVGVDDTEGARKAVDLLLAEGH
RKIAFIGDSRTRLAYTRRRMGYDAGLDAAGIPPDTRIVLEGDGTIESGRHAVEQLFMRDT
LPTAFMCVNDQTAIGVMIGLGARGYDIPRDFSVTGFDDVPQAVFISPPLTTIRQPRTAIG
KQAMALLLELLSDGRPTETEILLRPDLVVRNSVSAPSRNWSKR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaattccacgcccgcaaccatcgaagacgtcgcccggatcgccgaggtctctatc
gcgacggtttcccgggcaatccacatgccggagaaggtcgccaactccacgcgcctcaag
gtcaaccaggcgatcgccatcaccggctataccaccaatgccatggcgcgcagcctgagg
ctcggccgctccaacatgatccttgtcgtggcgcccgatatcggcgatcccaatttctcc
aacattctcgtcgggctggagaacgaagcgcgcgcgcacggctacggcatcctgatcggc
cacacgcagaacgatgcccagcgcggtctggaatatctgaaattcttcaattccaaccag
gcggccggattgatcctcttcaccggtatcctgccgttcgggcatcagacgatgaccgca
cggctgccgccgagcgtcggtgttttcgagcccgtcttcaacggcggcataccctatgtg
ggcgtcgacgataccgagggcgctcggaaagcggtggacctgctgctggccgaagggcat
cgcaagatcgccttcatcggcgattcgcgcacccggcttgcctataccaggcgccgcatg
ggttacgatgccggtctcgacgccgccggcatcccgcccgacaccaggatcgtgctcgaa
ggtgacggcacgatcgaaagtgggcggcatgcggttgaacagcttttcatgcgcgacacg
cttccgaccgccttcatgtgcgtcaacgaccagacggcgatcggcgtcatgatcgggctc
ggcgcgcgaggctacgatattccgcgggatttctcggtaaccggtttcgacgacgtgccg
caggcggtcttcatatcgccgccgctgaccacgatccgccagccgagaacggcaatcggc
aagcaggcgatggcgctgctgctcgaactcctgtccgatggccggccgaccgaaacggaa
atcctgctgcgcccggatctggtggttcgaaactccgtctcagccccatcgcgcaactgg
tcgaaacggtaa
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