Rhizobium indigoferae: U5G49_003855
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Entry
U5G49_003855 CDS
T09660
Symbol
dgoD
Name
(GenBank) galactonate dehydratase
KO
K01684
galactonate dehydratase [EC:
4.2.1.6
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00052
Galactose metabolism
rif01100
Metabolic pathways
rif01120
Microbial metabolism in diverse environments
Module
rif_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
U5G49_003855 (dgoD)
Enzymes [BR:
rif01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.6 galactonate dehydratase
U5G49_003855 (dgoD)
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Motif
Pfam:
MR_MLE_C
MR_MLE_N
Peptidase_M19
Motif
Other DBs
NCBI-ProteinID:
WQN38685
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All DBs
Position
3892570..3893718
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AA seq
382 aa
AA seq
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MKITKLTTYIVPPRWLFLKVETDEGIIGWGEPVVEGRALTVQAAVHELEDYLIGKDPFLI
EDHWTVMYRGGFYRGGAVHMSAISGIDQALWDIKGKALGQPIHSLLGGQLRDRIKVYSWI
GGDRPSDVANNAKEVVARGFKAIKLNGCEEMQIVDTNEKVEKAVETIAAIREAIGPHIGI
GVDFHGRVHKPMAKVLARELDPYKLMFIEEPVLSENKEALRDIVNHTSTPIALGERLFSR
WDFKQVLSDGYVDIIQPDLSHAGGITECRKIAAMAEAYDVALAPHCPLGPIALAACLQVD
AVSYNAFIQEQSLGIHYNKGNDILDYISNKEVFHYADGFVSIPQGPGLGIEVDEAYVIER
AKEGHRWRNPIWRHADGSFAEW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccaaactcaccacctatatcgttcccccgcgctggttgtttttgaaggtc
gagaccgacgagggcatcattggctggggcgaaccggtcgtcgaaggccgtgcgctcacc
gttcaggccgccgtccatgagctggaagactacctgatcggcaaggatcctttcctcatc
gaagaccactggaccgtgatgtatcgcggcggcttctatcgcggcggcgccgtccacatg
agcgcgatctcgggcatcgaccaggcgctgtgggacatcaagggcaaagcgctcggccag
ccgatccactccctgctcggtggccagctccgcgaccgtatcaaggtctattcctggatt
ggcggcgaccgtccttcggatgtcgccaacaatgccaaggaggtggttgcccgtggcttc
aaggcgatcaagctcaatggctgcgaggaaatgcagatcgtcgacaccaacgaaaaggtg
gagaaggcggtcgagaccatcgccgccatccgcgaggcgatcggcccgcatatcggcatc
ggcgtcgatttccacggccgcgtgcacaagccgatggcgaaggttctcgcgagggagctc
gacccttacaagctgatgttcatcgaagagccggtgctttccgaaaacaaggaagcgctg
cgcgatatcgtcaaccatacctcgacgccgatcgcgctcggcgagcggctcttttcgcgc
tgggacttcaagcaggttctgtcagacggctacgtcgacatcattcagccggatctctcc
catgccggcggcatcaccgaatgccgcaagatcgcggcgatggccgaagcctacgacgtg
gcgctggcgccgcattgcccgctgggcccgatcgcgctcgccgcctgcctgcaggtcgat
gccgtcagctataacgccttcatccaggaacagagcctcggcatccactacaacaagggc
aacgacatcctcgactacatctccaacaaggaggtgttccactatgccgatggtttcgtc
tcgatcccgcagggtccgggtcttggcatcgaggtcgacgaggcctatgtcatcgagcgc
gccaaggaaggtcaccgctggcgcaacccgatctggcggcatgccgacggcagctttgcc
gaatggtga
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