Rhizobium indigoferae: U5G49_003967
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Entry
U5G49_003967 CDS
T09660
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rif
Rhizobium indigoferae
Pathway
rif03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U5G49_003967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rif03400
]
U5G49_003967
Enzymes [BR:
rif01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
U5G49_003967
DNA repair and recombination proteins [BR:
rif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U5G49_003967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
WQN38788
LinkDB
All DBs
Position
complement(4021368..4022060)
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AA seq
230 aa
AA seq
DB search
MLSSAMDSVFEPLRGKVQIIRNEDDVRQGLEALLRLDPRLAPIVAEAGPIPLRLREPGFA
GLAHIIVSQMVSRASADEIWRRMLPADGSLTAEGYALLHAEAWREFGLSRAKAETLSRIA
EAVASGRLDLSGLCLKPPSEALGELTALKGVGPWTAEVYLMFCGGNADVFPAGDVALQNA
VGAAFGLAARPQAKALAELSEVWSPWRSVAARLFWAYYATKMRRDMVPIG
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgctttcttctgccatggattcggtttttgaaccactgcgaggcaaagtgcagatcatc
cgcaacgaagacgatgtcaggcaggggctcgaagcgttgcttcgccttgatccgcgcctt
gcgccgatcgtcgcggaggccgggcccattccgctgcgattgcgcgagcccggctttgcc
ggccttgcccatatcatcgtctcgcagatggtgtcgcgcgccagcgccgacgagatctgg
cggcgcatgctgccggcggacggttcgctgacggccgaaggttacgcactgcttcacgcc
gaggcatggcgcgaattcggcctgtcgcgcgccaaggccgagacgctgtcacggatcgcc
gaagcggtcgcctccggccgtctcgatctctccgggctctgcctgaaaccgccgagcgag
gcgcttggcgaactgacggcgttgaagggcgtcggaccgtggacggcagaggtctatctg
atgttttgcggcggaaatgccgatgttttcccggccggcgatgtcgcgctgcagaatgcc
gtcggggcggcattcggtcttgcggcacggccgcaggcgaaggcgcttgctgagctttcg
gaagtctggtcgccgtggcgctcggtggcggcacgacttttctgggcctactacgccacg
aagatgcgccgtgacatggtgccgatcggctga
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