Rhizobium indigoferae: U5G49_003980
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Entry
U5G49_003980 CDS
T09660
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00300
Lysine biosynthesis
rif00470
D-Amino acid metabolism
rif01100
Metabolic pathways
rif01110
Biosynthesis of secondary metabolites
rif01120
Microbial metabolism in diverse environments
rif01230
Biosynthesis of amino acids
Module
rif_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U5G49_003980 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U5G49_003980 (lysA)
Enzymes [BR:
rif01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
U5G49_003980 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WQN38801
UniProt:
A0ABZ0ZI71
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All DBs
Position
4031927..4033195
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AA seq
422 aa
AA seq
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MNHFEYRDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPFEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA
IYAHAARLPGIEVTGIDMHIGSQITELQPFDDAFKLLHDLVATLRADGHTIHHVDIGGGL
GIPYKDDNNPPPLPDAYAAIVKNQLRGLDCKIITEPGRLIVGNAGILVTEVLYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLMAVSTAGAYGAVQAGTYNSRLLVPEVLVRGSDFHTIRPRRTYAELISLDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatttcgagtaccgtgacggcgtccttcatgccgagaacgttcccgttcccgag
atcgccaaggcggtcggcacacctttctacgtctattccaccgcgacgctggaacgccac
taccgcgtcttttcggaagcgttcgccgacatggactccatggtctgttatgcgatgaag
gcgaattcgaaccaggcggtgctgaagacgctgggccgcctcggcgccggcatcgatgtc
gtctcggaaggcgaactgcgccgcgcgcttgccgccgatattccggcgagccgcatcatg
ttctcaggtgtcggcaagacgccgttcgagatggattttgcgcttgaggccggcatctac
tgcttcaacgtcgaatccgagcccgagctcgagatcctcaatcagcgcgccgtcagcgcg
ggcaagaaagcgccggtctccttccgcatcaacccggatgtcgatgcgaagacgcattcc
aagatctcgaccggcaagaaggaaaacaagttcggcatctcctgggagcgcgcccgcgcc
atctatgcccatgccgccaggctgccgggcatcgaggttaccggcatcgacatgcatatc
ggcagccagatcaccgagctccagcccttcgacgatgccttcaagctgttgcacgacctt
gtcgcgacgctccgcgccgacggccacaccatccaccacgtcgatatcggcggcggcctc
ggcatcccctacaaggacgacaacaatccgccgccgctgccggatgcctatgcggcaatc
gtcaagaaccagctgcgcggcctggactgcaagatcatcaccgagcccggccgcctgatc
gtcggcaatgccggcatcctcgtgaccgaggtcctctatgtgaaggatggcggcgaaaag
accttcgtcatcgtcgacggcgcgatgaacgacctcatccgcccgacgctctacgaggcc
tatcacgagatccggccggtaacaatttcagcggccaacgccccccgcatccgcgccgac
gtggtcggccccgtttgcgagaccggcgattatctggcgctcgaccgcgagatggcgatg
ccgaagcccggcgacctgatggccgtcagcactgccggcgcctatggtgcggtccaggcc
ggcacatataacagccgcctgctggtgcccgaagttctggtcaggggcagcgatttccat
acgattcgaccgcgcagaacctatgccgaactgatcagcctcgattccgttccggcctgg
ctcgactag
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