KEGG   Rhizobium indigoferae: U5G49_003980
Entry
U5G49_003980      CDS       T09660                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rif  Rhizobium indigoferae
Pathway
rif00300  Lysine biosynthesis
rif00470  D-Amino acid metabolism
rif01100  Metabolic pathways
rif01110  Biosynthesis of secondary metabolites
rif01120  Microbial metabolism in diverse environments
rif01230  Biosynthesis of amino acids
Module
rif_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rif00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    U5G49_003980 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    U5G49_003980 (lysA)
Enzymes [BR:rif01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     U5G49_003980 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: WQN38801
UniProt: A0ABZ0ZI71
LinkDB
Position
4031927..4033195
AA seq 422 aa
MNHFEYRDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPFEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA
IYAHAARLPGIEVTGIDMHIGSQITELQPFDDAFKLLHDLVATLRADGHTIHHVDIGGGL
GIPYKDDNNPPPLPDAYAAIVKNQLRGLDCKIITEPGRLIVGNAGILVTEVLYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLMAVSTAGAYGAVQAGTYNSRLLVPEVLVRGSDFHTIRPRRTYAELISLDSVPAW
LD
NT seq 1269 nt   +upstreamnt  +downstreamnt
gtgaaccatttcgagtaccgtgacggcgtccttcatgccgagaacgttcccgttcccgag
atcgccaaggcggtcggcacacctttctacgtctattccaccgcgacgctggaacgccac
taccgcgtcttttcggaagcgttcgccgacatggactccatggtctgttatgcgatgaag
gcgaattcgaaccaggcggtgctgaagacgctgggccgcctcggcgccggcatcgatgtc
gtctcggaaggcgaactgcgccgcgcgcttgccgccgatattccggcgagccgcatcatg
ttctcaggtgtcggcaagacgccgttcgagatggattttgcgcttgaggccggcatctac
tgcttcaacgtcgaatccgagcccgagctcgagatcctcaatcagcgcgccgtcagcgcg
ggcaagaaagcgccggtctccttccgcatcaacccggatgtcgatgcgaagacgcattcc
aagatctcgaccggcaagaaggaaaacaagttcggcatctcctgggagcgcgcccgcgcc
atctatgcccatgccgccaggctgccgggcatcgaggttaccggcatcgacatgcatatc
ggcagccagatcaccgagctccagcccttcgacgatgccttcaagctgttgcacgacctt
gtcgcgacgctccgcgccgacggccacaccatccaccacgtcgatatcggcggcggcctc
ggcatcccctacaaggacgacaacaatccgccgccgctgccggatgcctatgcggcaatc
gtcaagaaccagctgcgcggcctggactgcaagatcatcaccgagcccggccgcctgatc
gtcggcaatgccggcatcctcgtgaccgaggtcctctatgtgaaggatggcggcgaaaag
accttcgtcatcgtcgacggcgcgatgaacgacctcatccgcccgacgctctacgaggcc
tatcacgagatccggccggtaacaatttcagcggccaacgccccccgcatccgcgccgac
gtggtcggccccgtttgcgagaccggcgattatctggcgctcgaccgcgagatggcgatg
ccgaagcccggcgacctgatggccgtcagcactgccggcgcctatggtgcggtccaggcc
ggcacatataacagccgcctgctggtgcccgaagttctggtcaggggcagcgatttccat
acgattcgaccgcgcagaacctatgccgaactgatcagcctcgattccgttccggcctgg
ctcgactag

DBGET integrated database retrieval system