Rhizobium indigoferae: U5G49_004037
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Entry
U5G49_004037 CDS
T09660
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_004037
Transporters [BR:
rif02000
]
Other transporters
Pores ion channels [TC:
1
]
U5G49_004037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
WQN38857
LinkDB
All DBs
Position
4088098..4094520
Genome browser
AA seq
2140 aa
AA seq
DB search
MQMLAKIVNWIVRLTGYAVGVTLILAVAALAIFGFTSFGARIVTEKIASTLSNRDMTIQV
REPQGLLTGGLRAAEISFSDTRGVFAEIHGIAIDWNPLALLTGTFHAKRFEIEAINVLRK
PVRTLPSRPGAENSGGFALPIKVDIDRVALPDIKLAAPVAGRAFALAAEGSLSANGDGGE
AVVNVSRHAVPDARLAADIAFAPAENRLRLKAQLSEPKGGLLAGFLGLPDSPAVNIDLDG
QGPISDWKGKVQAALDGQQRAAIEARHQITADGLHHLDLKGGGDLSSLLPSAFRPLFAGQ
TNIDLATTFDDRGKIDIQTGNIATGSVVIAASGTLDPAGNNSLNANLLGTSGPVDFRWPL
AEGEARFLISGLNLALTGDAQAARLNVSGSLDTATLPQANIGNIKLTAKSDAFNLAARSG
SVQLRLVAGDTTFTDPNLNRAVQGPVTIASPLQISPSGIGFNGTTVESANINGGLNGSYR
LADKALTGNLKLTINPAALPAAVTSRFDGPISLESQVVGTIPSKFALSNLVLKSGTLEAA
GNVALDGGMLNADLSGRLPDVGKLIPGASGGAGYALRVGGELPAISVTANLKAASLEMAD
RVVGNLNIDLSGLADPKAPQGRIAATGTIDGQPIGINGDITSQDGKISIPALTADIGGNR
LTGHAEFSPTLEPTAALTFDFPNVGLLAALGGQKAEGDLKGSLGVSSDSGKIALKLLATG
GSIHRDTLAIVKPDIDVTISDLNALAANGTIKAEGVSAGTNKLAGLSLGFTKQQNHTDFD
LDAAYDGNPVLAAGNIEAQDGTIHLNLDRFSASPRNIPIELAAPTQVAIGGGAANLNGLT
LKTGTGSVTVTGSAGETLKLDADIRELPAALANGFVPNLSAGGTISGTIAVTGTPAAPVA
DFKLGWKDATTGQTKGAGLAPLDITAGGKFADNKLDFDTTVGSDDGLSLKAAGNVALADP
KAPVLDVNADILNLPARIANGFVPDLAAAGTITGKVTASGSLAAPTANFDLNWKDAATSQ
TKRAGLADLGVKASGKFADSKLDFNTVVDGANSLSLKATGNVAITGTTIGNVKVDAALAN
VPANIANSFAADLAAEGAISGKISASGSLSAPSADFDLTWKDAATSHTKRAGLTALGVTA
SGKFADNKLDFNAVVGGANSLSLKANGNLAIKGTTIDNLTVDATLANVPANIANSFVADL
AAEGAISGRISATGSLPVPNGDFDLTWKDAATSHTKRAGLAALGVTASGKFAENKLDFNA
AVSGDKDLSLKAMGNVTLAGTAIDSIKVDAEIAKLPASLANAFVPDLAAGGTISGTASAS
GTLAAPKADFKLDWTDAATSQTRSAHLSGLALTTSGRFADDRLDFDANLAGQDGLSLKAA
GNVAISGTSVKTLDVKADLANLPAGLANGFVPGLGAEGTVSGTASASGALPKPAVDFKLD
WKNAATAQTKSSGLSGLSAAASGKFANDRVDFDANIAGKDGVLAKATGGVTIAGTAIRDL
SINADIPALPANIANAFVPGLGAEGTLSASAITSGTPANPIVDFKLNWKDAATSHTKAAG
LSRLALAATGKYAGDRLDFDAALNGSGGIALKATGNLAIAGTSIKSLDVTANTTNLPASI
ANGFVPGLAAEGAVSATAKATGALSAPSVDFKVDWKNAATSQTKGAGLSPFSIGASGKLA
GNRLTVDTSLAGDAGMSLKGGGSVVITGNRALDMRFNGNLPFAVLGAPLAQQGLVADGVA
TVNLQIGGTAAAPVINGTVSTSGAKLVDVRRNLAVNNLAATVTFNGSQAVISRLSGNLGG
GGTISASGTIGIQPAGGFPADISIKLDKAVYVDGTLVVSTVNGTVGLRGPIMNATLSGKL
RLDKTSITVPEKLPTSLREVDIRHKNAPRAVLAQLRDDGERKPGEKSSVITLDLEIDAPS
HIFVRGRGIDAELGGRVTIRGTAAAPIVTGGFVMRRGRMTILNRRLDFSDKSRITFAGDL
TPALDMEATSASGSTTLTVDVAGLATDPAITFSSSPQLPQDEVLAQLIFGQSMSKLSPVQ
IAQLADAVSQLAGNRSTSLFEGLRNQLGVDDFDVSTDSKGQTSVSVGRYLNDRTYFELQQ
GGSAGAKAVINLDVGRGVKLRGAAGGNGAGEAGIVYEREY
NT seq
6423 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgctggcaaaaatcgtcaactggatcgtacggctgaccggctatgccgtcggc
gtcactttgattctcgctgtcgcggcccttgcgatcttcggcttcaccagttttggcgcc
cgcatcgtcaccgaaaagatagcctccacgctttccaaccgcgacatgacgatccaggtt
cgtgaaccgcaaggtcttctgaccggcgggcttcgcgccgccgagatctccttctccgac
accaggggcgtctttgcggaaattcatggcatcgcgatcgactggaatccgctggcgctg
ctgaccggaaccttccacgccaaacgcttcgagatcgaagcgatcaacgtgctgcgcaag
ccggtgcgcaccctgccctcgcggcccggagctgaaaattccggcggattcgctcttccg
atcaaggtcgatatagaccgcgtcgcgctgcccgatatcaaacttgccgcacccgttgcc
ggccgcgcctttgcgctcgccgccgagggcagcctttcggcgaacggcgatggcggcgag
gccgtcgtcaatgtcagccgtcacgcggttccggatgcgcggcttgccgccgacatcgct
tttgcgccagccgaaaaccggctgcggctgaaggcgcagctttccgagccgaagggcggg
ctgctggcgggctttctcggcttgccggatagcccggccgtcaatatcgatctcgacggc
caggggccgatatccgattggaaaggcaaagtgcaggccgccctcgacggacagcagcgc
gccgcaatcgaagcccggcatcagatcacggcagacggattgcaccacctcgacctcaag
ggcggcggtgacttgagctcgctgcttccatcggcattccggccgctttttgccggccag
accaatatcgatcttgccaccaccttcgacgaccgcggcaagatcgatatccagaccggc
aatatcgccaccggcagcgtcgtgatcgccgcctcgggcaccctcgatccagccggcaac
aacagcctgaacgccaatctgctcggcacgtcggggcctgtcgatttccgctggccgctc
gctgaaggcgaagcgcgcttcctcatttctggcctcaacctggcgctaaccggcgatgcc
caggccgcccgactgaacgtcagcggctcgctcgacaccgcaacccttccgcaggccaat
atcggcaacatcaagctgaccgcaaagagcgacgccttcaatctcgccgcccgttccggc
agcgtccagttgcgcctcgtcgccggcgatacgaccttcaccgacccgaacctcaatcgc
gccgtccaaggcccggtcacgatcgcctcgccgctgcagatctcgccctccggcatcggc
ttcaacggcaccaccgtcgaaagcgccaatatcaacggcggcctcaatggctcctaccgg
ctggcagacaaagcgctgaccggcaacctcaagctcaccatcaacccggcagctctgccg
gctgcggtgacaagcaggttcgacggaccgatctcgctcgaaagccaggtggtcggcacc
atcccgtcaaaattcgcactgtccaatctcgtcctgaaatccggcacgctcgaagccgcc
ggcaacgtcgcgctcgacggcgggatgttgaatgccgatctttccggccggctgcctgac
gtcggcaagctcatccccggcgccagtggtggggcgggttatgcgttgagagtgggaggt
gagctcccggcaatctccgtgacggccaatctcaaggccgccagccttgaaatggccgac
cgcgtggtcggcaacctcaatatcgacctgtcgggtctcgccgatcccaaggcgccgcag
ggcaggatcgccgccaccggcacgatcgatggccaaccgatcggcatcaacggcgacatc
acctcgcaggacggcaagataagcattccggcgctgaccgccgatatcggcggcaaccgg
ctgaccggccatgcagaattctcgcctaccctggagccaacagccgcactgaccttcgat
ttccccaatgtcggcctgctcgccgcactcggcggacagaaggccgaaggcgatctcaag
ggttcgctcggcgtcagcagcgacagtggcaagattgcgctcaagctgcttgcaacgggc
ggctcgatccaccgtgatacgcttgcgatcgtcaagccggatatcgatgtcacgatcagc
gatctcaatgcccttgccgcaaacggcactatcaaggccgagggggtaagcgccggaacg
aacaagcttgccggcctttcgctgggttttaccaagcagcagaaccataccgacttcgat
ctcgatgctgcctatgacggcaatcccgtgctggccgcgggcaatatcgaggctcaggac
ggcacgatccacctgaaccttgatcgcttctcggcaagcccccgcaatatcccgatcgaa
ctggccgcaccgacgcaggtcgccatcggcggcggcgccgccaatctgaacggactgacg
ctgaaaaccggcaccggctcggtaaccgttaccggttccgccggcgaaacactgaagctt
gatgcagacatccgcgagctgccggcagcgctcgccaacggtttcgtgcccaacctttca
gccggcggcacgatctccggaacgattgccgtgacgggaacgccggcagcaccggtcgcc
gacttcaagctcggctggaaggatgcgacgacgggccagaccaagggcgccggcctggcg
ccgctcgacatcaccgccggcggcaaattcgccgacaacaagctcgatttcgacacgacc
gtcggcagtgatgacggcctctcgctcaaggccgccggcaatgtcgcgctcgccgacccg
aaggcaccggtgcttgatgtcaacgccgatatcctcaacctgcctgcccgcatcgccaac
ggtttcgttcccgatctcgccgccgcaggcacgattacaggaaaagtgacggcctccggc
tccctcgctgcgccgaccgccaatttcgatctcaactggaaagacgcggcgacgagccag
acgaagcgtgccggccttgcggatctcggcgtgaaggcatccggaaaattcgccgatagc
aagctcgatttcaatacagtggtcgacggcgccaacagcctctcgctgaaagcaaccggc
aatgtcgccatcacgggcacgacgatcggcaacgtcaaggtcgacgctgcgctggcaaat
gtcccggcgaatatcgcaaatagtttcgccgccgacctcgccgccgaaggcgcgatctca
ggaaagatctcggccagcgggtcgctttccgctccgagtgccgatttcgatctcacttgg
aaagacgcggcaacgagccacacaaagcgcgccggccttactgcgctcggcgtgaccgca
tcgggaaaatttgccgacaacaagcttgatttcaacgcggtggttggcggcgccaacagc
ctgtccttaaaggcaaacggcaatcttgccatcaaaggcacgacgatcgacaacctcacg
gtcgacgccacactggcgaatgttccggcaaatatcgcaaacagcttcgtcgccgatctc
gccgccgaaggtgcgatctcaggaaggatctcggccacgggatccctcccggttccgaat
ggagatttcgatctcacttggaaagatgcggcgacgagccacacgaagcgtgccggcctt
gcagcgctcggcgtgaccgcatcgggaaaatttgctgagaacaagcttgatttcaacgct
gcagtcagcggcgataaagacctctcactgaaggccatgggcaatgtcacactcgccggc
acggcgatcgacagcatcaaggtcgatgccgagatcgccaagcttccggccagtctcgca
aatgccttcgttcccgatctggcggccggcggcacgatatccggcactgcgtccgcctca
gggacactcgccgcaccgaaagccgacttcaagctcgactggacggatgctgcgaccagc
cagaccagaagcgctcatctctcgggcctcgcgctcaccacatccggacgcttcgccgac
gaccggctcgatttcgatgccaatctcgccggccaggacggcctctcgctgaaggccgcc
ggcaacgtcgcgatatcaggcacctccgttaaaaccctcgacgtcaaggccgatctcgcc
aacctgccggcaggcctcgccaacggcttcgtcccgggtcttggcgcagagggcaccgtg
tcgggaacggcatctgcctccggagcgcttccgaaaccggccgtcgatttcaaactcgac
tggaagaacgctgcgaccgcccagaccaagagcagcggcctttcgggcctgagtgctgcg
gcgtccggcaagttcgccaacgaccgggtcgatttcgatgccaacatcgccggcaaggac
ggcgtgttggccaaggcgacgggcggcgtcacgatcgcgggaacggccatccgggacctt
tcgatcaatgccgatatcccggcgctgccggcaaatatcgcaaatgctttcgttcccggt
ctcggtgccgagggcacgctttcggcaagcgccataacgtcgggaacgccggcaaatccg
atcgtcgatttcaagctcaactggaaagatgccgcgaccagccacaccaaggctgccggc
ctttcccgccttgcgctggcggcgaccggaaaatacgccggtgacaggctggattttgat
gccgcgctcaacggcagcggcggcattgcgctgaaagccaccggcaatctcgccatcgca
ggcacgtcgatcaagtctctcgatgttacggcgaataccaccaatcttccggccagcatc
gccaacggcttcgttcccggccttgcagccgagggcgcggtctcagcaaccgcaaaggcc
accggcgcgctatcggcgccctccgtcgacttcaaggtcgactggaagaacgcggcgacg
agccagaccaaaggtgccggcctttcgccgttcagcatcggtgcatcaggcaaacttgcc
ggaaacaggctgacggtcgacaccagccttgccggtgacgccggcatgtcgctgaaaggc
ggcggcagtgtcgtgatcacaggcaatcgcgccctcgacatgcgattcaacggcaatctt
cctttcgccgtgctcggcgccccgcttgcgcagcagggcctcgttgcggacggggtcgcc
accgtcaacctccagattggcggaacggccgcagcgcccgttatcaacggcactgtctcg
acatcaggcgcgaagctcgtcgacgtccgacgcaatcttgccgtcaacaatcttgcggcg
accgtgaccttcaatggcagccaggcggtgatatcgcgcctcagcggcaaccttggcggc
ggcggcacgatttcggccagcggcaccatcggcatccagccggccggcggctttcccgct
gacatttcgatcaagctcgacaaggcggtctatgtcgatggaacgcttgtcgtctcgacc
gtcaatggcacggtcggcctgcgcgggccgatcatgaatgcgacgttgagcggcaagctt
cggctggacaaaacctcgatcacggtcccggaaaaattgccgacctcgctgagagaagtc
gacatccggcataagaatgcgccgcgggcggttcttgcgcagctgcgcgatgacggtgag
cggaaacccggcgagaaatcctccgtgatcacgctggatctcgaaatcgatgcgccctcg
catatcttcgtacgcggccgcggcatcgatgccgagcttggcggccgggtgaccatccgc
ggaacagcggctgcacccatcgtgaccggcggtttcgtcatgcgccgcggtcgcatgacc
attctcaaccgccgcctggatttctccgacaagagcaggatcaccttcgccggcgacctg
acgccggcgctcgatatggaagcgacctcggcctccggctcgacgacgctgaccgtcgac
gtcgcgggtctcgccaccgaccccgcgatcaccttttcctcctcgccccagctgccgcag
gacgaggtgctggcgcagctgatcttcggccaatcgatgtcgaagctctcgccggtgcag
atcgcccagctcgccgacgccgtcagtcagctggccggcaaccgctcgacctcgcttttc
gaaggcctgcgcaaccagctcggcgtcgacgatttcgacgtcagcaccgattccaaggga
cagacgagcgtcagcgtcggccgttatctcaacgaccgcacctatttcgaattgcagcag
ggcggttcggccggcgccaaggcggtgatcaacctcgatgtcggccgcggcgtcaagctg
cggggagcggccgggggtaatggcgcgggcgaagctggcattgtctatgaacgggaatac
tga
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