Rhizobium indigoferae: U5G49_004543
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Entry
U5G49_004543 CDS
T09660
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00550
Peptidoglycan biosynthesis
rif01100
Metabolic pathways
rif01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U5G49_004543
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U5G49_004543
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rif01003
]
U5G49_004543
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rif01011
]
U5G49_004543
Enzymes [BR:
rif01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
U5G49_004543
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
U5G49_004543
Glycosyltransferases [BR:
rif01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
U5G49_004543
Peptidoglycan biosynthesis and degradation proteins [BR:
rif01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
U5G49_004543
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WQN39346
UniProt:
A0ABZ0ZIN9
LinkDB
All DBs
Position
complement(4638068..4640422)
Genome browser
AA seq
784 aa
AA seq
DB search
MAGRGRSGDRIEPSFSGRPARDDDEFSLDADDRIAGGRSQRRGGSKPPPQRAAPRRRREP
REREGGGFFGFLRRVIYWCVVLFIWAGIGVAGLVVYYGSRMPSASTWAIPERPPNVKITA
VDGSVIANRGATGGEALSLENMSPYIPEAVIAIEDRRFYSHFGVDPLGLGRAIVTNFTAG
HMVQGGSTLTQQLAKNLFLSPDRTLERKVQEVLLALWLEQKYTKDQILAMYLNRVFFGSN
AYGVEAASRRYFNKSARDVNLGEAAVLAGLLKAPSRLSPARDADAANARAQLVLAAMREQ
GFITDSEVKTAMSQTPASAKSYWSGAGHYVADMVMDELPGLIGDVKEDVIVDTTIDKSLE
KKAEQSLVDVLDKEGGKLDASQAALVSIDGTGAIRALVGGRDYATSQFNRAVKAKRQPGS
SFKPFVYAAALEKGLTPYSVFNDAPIRIGDWTPENYEKKYNGEVTLATALAKSLNTVAAQ
LVMYDGPDQVIKLAHRLGIESELQPNASIALGTSEVSLMELTASYAAFMNGGYKATPHVI
RRVTTAEGKVLYENTYDSPPRVLSEQIVAEMDAMMMGVIDNGTGKSAKIPGWQAAGKTGT
TQNSRDALFVGFTSNLTTGVWFGNDDGKPMKKVTGGGLPAKAWKEFMIAAHKGLSPAPLF
GNGQLIGDPNNGQPMAQAAPGDGQTGDGQLGSGQPMTAEAPPSTIGGIISGVFGGDDNAN
RYPQAPVRQQAASSGNGPVPPADIAEGGGSNYEGVVPPGDVGGAQTTSSVQPRRTTLLDL
IMGQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagaggcagatcaggcgacagaatagaaccgtccttcagcggccgcccggcg
cgcgacgatgacgaattctcgctcgatgccgacgatcgcattgccggaggccgatcccag
cgccgcggcggctcgaaacccccgccgcaacgtgcagccccccggcggcggcgcgagccg
cgggagcgtgaaggcggcgggtttttcggattcctgcgccgcgtcatctactggtgcgtc
gtgcttttcatctgggcgggcatcggcgttgccgggcttgtggtctattatggctcgcgc
atgccgagcgccagcacatgggcgatcccggaacggccgccgaatgtgaagattaccgcc
gtcgacggcagcgtcatcgccaatcgcggcgcgaccggcggcgaggcgctgtcgctcgaa
aacatgtcgccctatattccggaagccgtcatcgccatcgaggatcggcgtttctattcg
catttcggcgtcgatccgctcggcctcggccgggcgatcgtgaccaacttcacggccggc
cacatggtgcagggtggctcgacgctgacgcagcagcttgccaagaacctcttcctctct
ccggacaggacgctggaacgtaaggtgcaggaggtgctgctcgcgctgtggctggagcag
aaatacaccaaggaccagatccttgcgatgtatctcaaccgggtgttcttcggatcgaac
gcctatggcgtcgaggcggcatcacgccgctacttcaacaaatcggcgcgtgacgtgaac
ctcggcgaggccgcggtgctggccggcctgctcaaggcgccgtcgcggctttcgccggcc
cgcgatgccgacgcggcgaatgcccgcgcccaactcgtgctcgcagcaatgcgcgaacag
ggcttcatcaccgattccgaggtcaagacggcgatgtcacagaccccggcctcggccaag
agctactggtcgggcgccgggcactatgtcgccgacatggtgatggacgagctgccgggt
ctgatcggcgacgtcaaggaagacgtcatcgtcgatacgacgatcgacaagtcgctggaa
aagaaggccgagcaatcgctggtcgacgtgctcgacaaggagggcgggaagctcgacgcc
tcgcaggcggccctcgtctcgatcgacggcaccggcgcgatccgggcgctcgtcggcggc
agggactatgcgacgagccagttcaaccgcgccgtcaaggccaaacgccagccgggttcc
tcgttcaagcccttcgtctatgccgcagcactcgagaaggggctgacgccctattcggtg
ttcaacgacgcgccgatccggatcggcgactggacgcccgaaaattacgagaagaaatac
aatggcgaagtgacgctggcgaccgcgctggccaagtcgctgaacacggtggccgcccag
ctggtgatgtatgacgggccggatcaggtgatcaagcttgcccaccggctcggcatcgaa
agcgagctgcagccgaacgcctcgatcgcgctcggcacgtccgaggtgtcgctgatggaa
cttaccgcctcctatgccgccttcatgaacggcggctacaaggcgacgccgcacgtcatt
cgccgggtgacgactgccgagggcaaggttctctacgaaaatacctatgacagcccgccg
cgcgtgctctccgagcagatcgtcgccgagatggatgccatgatgatgggcgtcatcgac
aacggcaccggcaagagcgccaagatccccggctggcaggcggcgggaaagaccggcaca
acgcagaattcgcgcgacgcgctcttcgtcggcttcaccagcaatctcaccacgggtgtc
tggttcggcaatgacgacggcaagccgatgaagaaggtgaccggcggcggcctgcccgcc
aaggcctggaaggaattcatgatcgccgcccacaagggtctttcgccggcaccgctcttc
ggcaacggccagttgatcggcgatccgaacaatggtcagccgatggcgcaggcagcccct
ggtgatggacaaacgggcgatgggcagctgggcagcgggcaaccgatgacggccgaggcg
ccgccgtcgacgatcggcggtatcatttccggcgtcttcggcggcgacgacaatgcaaac
cgctatccgcaagcgccagtccggcagcaggcggcaagctccggcaatggcccggttccg
ccagcagacattgccgaaggcggcggctcgaactatgagggcgtggtgccacccggggat
gtcggaggcgcgcagacaacctcttccgtccagccgcggcgcacgacgctgctcgatctg
atcatgggccagtga
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integrated database retrieval system
