Rhizobium indigoferae: U5G49_004604
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Entry
U5G49_004604 CDS
T09660
Name
(GenBank) type II and III secretion system protein family protein
KO
K02280
pilus assembly protein CpaC
Organism
rif
Rhizobium indigoferae
Pathway
rif02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U5G49_004604
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rif02044
]
U5G49_004604
02035 Bacterial motility proteins [BR:
rif02035
]
U5G49_004604
Secretion system [BR:
rif02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
U5G49_004604
Bacterial motility proteins [BR:
rif02035
]
Pilus system
Pilus assembly proteins
U5G49_004604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Hpf1_C
CBM_35_2
Motif
Other DBs
NCBI-ProteinID:
WQN39406
LinkDB
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Position
4701169..4702668
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AA seq
499 aa
AA seq
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MGNSTRRAGPLLTGCLSLAIGVSGIVPASFVPVLGAGEARADSDSLVRISQTGSNAHRRL
KLGLNKAVVVDLPEDAHDILVSDPTMADAVTRTSRRIYLFGKKVGQTNIFVFGAGGQEIV
NLDIEIERDVSGLEVNLRRFIPDSNINVEIVSDNIVLTGTVRTPQDATQAADLAQVFLKG
GEATTRTETASGTGGDSSVALFAEGRQTSQVVNLLQIEGEDQVTLKVTIAEVRREVLKQL
GFDNLVSNSSGMTVAQLGSPGTDSATSTVGGGLAALFKSSIGKYDISTYLNALEQAKVVK
TLAEPTLTAISGQAATFNSGGQQLYSTTDSNGNVTVTPFNYGINLAFKPVVLSSGRISLQ
IKTNVSEPVAGSGNATYQRRSAETSVELPSGGSIALAGLIRDNVSQTMGGTPGVSKIPLL
GTLFRQKGFERQETELVIIATPYLVRPVARNQLNRPDDNFSPENDGATFFLNRVNKVYGR
SEAPVADAQFHGSIGFIYK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgggcaattcaacgcggcgcgccggacctctcctgacaggttgcctttcgctggcaatc
ggagtctccggtatagtgcccgcctctttcgttccggttctcggcgcaggcgaggcgcgc
gccgattccgatagcctggtccggatctcgcagaccggctccaatgcccatcgccggctg
aagctcggcctcaacaaggccgtcgtcgtcgatctgccggaggacgcgcatgatatcctc
gtctccgatccgaccatggccgatgctgtgacccgcacctcgcggcgcatctacctgttc
ggcaagaaggtcggccagaccaatatcttcgtcttcggagccggcggacaggagatcgtc
aatctcgatatcgagatcgagcgcgacgtctccggcctcgaggtcaatctccgccgcttc
attcccgactccaacatcaatgtcgaaatcgtctccgacaacatcgtgctgaccggcacg
gtgcgcacgccgcaggatgccacgcaggcggccgatctggcgcaggtcttcctgaagggt
ggggaggcgacgaccagaactgagacggcatccggcaccggcggcgacagttcggtggcg
ctatttgccgaaggccgccagacttcgcaggtcgtcaacctcctgcagattgagggcgag
gaccaggtcaccctcaaggtgacgatcgccgaggtccgccgcgaggtgctgaagcaactc
ggcttcgacaatctggtttccaattcctccggcatgacggtcgcccaactcggcagtccc
ggcaccgacagtgccacatcgacggttggcggcggtctggcggcgctcttcaagagctcg
atcggcaaatacgatatttcgacctacctcaacgcgctggagcaggccaaggtcgtcaag
acgctcgccgagccgacgctgacggcgatatcgggccaggccgcgaccttcaattccggc
ggtcagcaactttattcgacgaccgacagcaacggcaacgtcaccgtcacgccgtttaac
tacggtatcaacctcgccttcaaaccggtcgtgctgtcatcgggacgcatcagcctgcag
atcaagaccaatgtctccgaaccggtggccggcagcggcaacgccacctatcagcgccgt
tcggcggagacttcggtggagctgccctcgggcggttcgatcgcgctcgccggtcttatc
cgcgacaacgtttctcagacgatgggcggcacaccaggcgtctcgaagatcccactgctc
gggacgctcttccgccagaaaggtttcgagcgtcaggaaaccgagctcgtcatcatcgca
acgccctatctggtacgtccggtggcgcgcaatcagctcaaccggccggacgacaatttc
agccccgaaaacgatggcgcaaccttcttcctcaaccgtgtcaacaaggtctatggccgc
agcgaggcgcccgtcgccgacgcgcagttccacggctcgatcgggttcatctacaaatga
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