Rhizobium indigoferae: U5G49_004832
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Entry
U5G49_004832 CDS
T09660
Name
(GenBank) DUF1989 domain-containing protein
KO
K28979
trimethylamine-oxide aldolase [EC:
4.1.2.32
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00680
Methane metabolism
rif01100
Metabolic pathways
rif01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
U5G49_004832
Enzymes [BR:
rif01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.32 trimethylamine-oxide aldolase
U5G49_004832
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCV_T
DUF1989
GCV_T_C
Motif
Other DBs
NCBI-ProteinID:
WRW39491
UniProt:
A0ABZ1DTG3
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All DBs
Position
pRinCIP108029b:complement(57417..59786)
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AA seq
789 aa
AA seq
DB search
MRELHPAMTGLRSAAPSLVHYPGIPTLPEGTERYRAKGGGSVVVRVEPGDRVSVIDSEGG
QVCEISFLDEKGRFLATGLGTPFSNSAEGLKAILQAEDESAARTRAALQRRGADLAVAGA
LSIFGAGSTPGSRAEFTVSMKGLLIVAAPASAMSPEAQDTATPIEIRIKRSVLIRDYASA
LPEPAADPIEDIRIRAATAAAYFVRAGEFIQIIDVYGRQCTDFQAFAARKVDKGLDLALD
STVTRTLLGRSYPMPGLPSKAFDRDFEPLVEIVQDTVGRHDAFATACNSRYYDDMGYPGH
VNCTDNFNAVLAPYGIAGRKGWEALNYFYNTNIDHNNQLYLDEPWSRPGDYVLMRALTDL
VCVSSSCPDDIDAANGWDPTDIHVRTFSGKEKFSRAVAYRMTPDADAELTRETSFHPRLS
TLTRDYTEYRGYWLPNRFSSEGPVEEYWACRERAAVIDLSPLRKFEVTGPDAEELLQYCL
TRDVRKLSTGQVVYSAMCYENGGMIDDGTLFRLGDKNFRWIGGDDFSGIWLRQQAEKKGF
KAWVRSSTDQIHNIALQGPKSRDILKEIIWTAPRQPAIGELEWFRFTVGRIGGFEGVPIV
VSRTGYTGELGYEIFCHPKDALTVFDAVWEAGQPHGLKPMGLEALDMVRIEAGLIFAHHE
FTDQTDPFEAGIGFTVPLKSKQDDFIGREALIRRKEHPRHLLVGLDIKANEAVGHGDCIH
IGRAQVGVITSATRSPILGKTIALARIDVMHANPGTEVEIGKLDGHQKRLPATIVPLSHY
DPQKTRPRS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaacttcaccctgctatgacgggcctgcgatcggccgctccgagcctcgtgcat
tatccaggcattcccaccctgccggagggaaccgagcgctacagggcaaagggcggcggc
tcggtcgttgtgcgcgtcgagccaggcgaccgcgtcagcgttatcgacagcgagggtgga
caggtctgcgagatctctttcctcgatgaaaaagggcgcttcctggcgaccggtctcgga
acgccattcagcaattcggccgagggcttgaaggctattcttcaggcggaggatgagagt
gctgcccgcacgcgtgcagcacttcagcgtcgcggcgccgatctggccgtggccggcgcg
ctcagcatcttcggggccggatcgaccccgggcagccgggcggaattcacggtctccatg
aagggcctactgatcgtcgcggcacccgctagcgccatgtcgccggaggcgcaggatacg
gcgacgccgatcgagatcaggatcaagcgcagcgtgctgatccgcgattatgcctctgcc
ctgccggaaccggccgctgatcccatcgaggatatccgcattcgggcggcgaccgccgcg
gcctatttcgtgcgggccggcgaattcatccagatcatcgatgtctatggacgccagtgc
accgatttccaggcttttgccgcccgcaaggtcgacaagggtctcgatctcgcgctcgat
tccaccgtcacccgcacgctgctcggccgcagctatccgatgccgggcctgccctccaag
gccttcgaccgcgacttcgagccgctggtcgagatcgtgcaggatacggtcggccgccac
gacgctttcgcgaccgcctgcaattcgcgctattacgacgacatgggttatcccggccac
gtcaactgcacggataatttcaatgcggtgctggcgccctacggcattgccggccgcaag
ggctgggaagcgctgaactatttctacaacaccaacatcgaccacaacaaccagctctat
cttgacgagccctggtcgcgccccggtgattacgtgctgatgcgggcgctgactgacctc
gtctgcgtctcctcgtcctgccctgacgatatcgacgcggcgaacggctgggatccgacg
gatatccacgtccgcaccttttccggaaaagagaaattctcacgagcggtagcctatcgc
atgaccccagatgccgacgccgaactgacccgcgaaacctccttccatccccgcctctcc
acgctgacgcgggactacaccgaatatcgcggctactggctgccgaaccgcttttccagc
gaagggcccgtcgaggaatattgggcctgccgcgagcgcgccgccgtcatcgacctctcg
cccttgcggaaattcgaggtgacggggccagatgccgaggagttgctgcaatattgcctg
acgcgcgacgtgcgcaagctgtcgaccggccaggtcgtctattcggccatgtgctacgaa
aatggcggcatgatcgatgacggcacgctgttccggctcggcgacaagaactttcgctgg
atcggcggcgatgatttcagcggcatctggctgcgtcagcaggccgagaagaagggcttc
aaagcctgggtccgctcatcgaccgatcagatccacaatatcgccctgcagggtccgaaa
agccgcgatatcctgaaggagatcatctggacggcgccgcgccaaccggcaatcggcgag
ctcgaatggttccgcttcaccgtcggccgcatcggcggcttcgagggtgttccaatcgtc
gtctcgcgcacgggctataccggcgaactcggctacgagatcttctgtcatccgaaggat
gcgctgacagtgttcgacgccgtttgggaggccgggcagccgcatgggttgaagccgatg
gggctggaggcgctcgacatggtccgcatcgaggcgggcctgatcttcgctcatcacgaa
ttcaccgaccagacggacccgttcgaagccgggatcggcttcacggtgccgttgaaatcc
aagcaggacgatttcatcggccgcgaggcgctgatccgccgcaaggagcatccgcgccac
ctgctcgtcggcctcgacatcaaggccaacgaggccgtcggccatggcgattgcatccat
atcggccgggcccaggtgggcgttatcaccagcgccacgcgctcgccgatcctcggcaag
acgatcgcgcttgcccgcatcgacgtgatgcatgcaaaccccggcaccgaggtcgagatc
ggtaagctcgacggccaccagaagcgcctgcctgcgacgatcgtgccgctttcgcattac
gacccgcagaagacgcgaccgcgctcgtaa
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