KEGG   Rhizobium indigoferae: U5G49_004853
Entry
U5G49_004853      CDS       T09660                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
rif  Rhizobium indigoferae
Pathway
rif03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rif00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U5G49_004853 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rif02044]
    U5G49_004853 (tssM)
Secretion system [BR:rif02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U5G49_004853 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical nSTAND_NTPase5 Cadherin_C_2 Fig1
Other DBs
NCBI-ProteinID: WRW39511
UniProt: A0ABZ1DUZ7
LinkDB
Position
pRinCIP108029b:complement(82544..86074)
AA seq 1176 aa
MAIFRFLWAVLTSRWLWTFIGLILLSLIVWIFGPIVSVGDSAPFASEIVRLVIIGLLFLL
FIIWWVAVRRRAVRANRLFVSEIAPQPEAPPSPAEEGVAAVGVKFREVMAGLKRQKVGGR
KFLREMPWYVIIGPPATGKTTALRQSGLSFPIDLTDDLHGVGGTRNCDWFFTEEAVLIDT
AGRYVQQESQPEVDAAEWLGFLDLLKKHRGRRALNGVIVALGIDTLSEDDAAIRMHGRQI
RKRLAELQERIGIRLPVYLMLTKADLIKGFESFFGALSTADREQVWGVTFPPGARIDGTE
VTGEFSALAGVLERRLIPRLEGEENLTARAEIFRFPAQVESLSEPVRVLIETVFGESKYA
ESAWLRGIYLTSATQEGTAVDRLTAALASSFGLPAQPATPILRAEKRSFFLKDLLTKVIF
KEAGLGTFDPAAEDRRVWIWRGAAVAATAFVVIAGLLFTISYRKNDAALAAQAEQLEALQ
LPLTPVAARQAPVDPLDLDLALEAATEVANARTEQPGGIASLIGPSAETEIRQAQSDAYN
RTLRNILEPRMVALIEATMWRQIRDPEFQLGALKTYRMMTGLSPMDPDFAKQWWTEKLPE
SAPVPPFKTEMAADHQLAAIDNMATEQAFVAPDEALVGEALRTICSIPLPVRAYSALLSD
PEVTALKEWIPADHVGPNGLKVLARRSDKTLRVGISGAFTYDGFHNVILTRLEDVATQAA
LDRSVFAGGCSESASPSVAALSQDILKLYYDDYIAKWDSFMRDVRLAPLADLQTASENLK
DLSSADSSMKRLLTAIVRETELTRPEDDGGGQAPPPGASKLLSKLGKIGKLAAKGVKMMP
AAGSKSDVDLSGALISEHFKPIKAAIVEVDGQPPALNDAVAALTALSNMLQTVSASPDAQ
DAMKRQGGLAELTGAVAKQAVTLPDPLDDWLAGLAGNTSALATGAVTSELNAIWRADVLP
FCQAALTNRYPFVPDSAIDVNVVDFQRVFGPGGLIDSFINNNLVNYIDTTSHPWKWRSDI
KLDPGPLAALEQARLIRDSLFPGGAGPILTFTLEPKDLSPTVSRVTLNVDGQSLSYFNNP
TRPQPMTWPGKDGTGVITLAFQPLDGSPEVMVSETGSWAFLRMLRAGRLSGTNLAELFKL
RLAAQGYYADFELRAASVANPFDLKMFARFSCPTQL
NT seq 3531 nt   +upstreamnt  +downstreamnt
atggcgatcttccggttcctctgggctgttctcacctctcgctggctctggactttcatc
ggactcattctgctgtcgctcatcgtctggatattcggccctatcgtcagcgtcggagac
agtgcgccgtttgcttccgagatcgtgcggctagtcatcatcggccttttgttcctcctg
ttcatcatctggtgggttgcggtgcggcggcgcgcggtgcgtgccaaccgcctctttgtt
tccgagattgcccctcagcctgaggctccgccaagtccggcggaagagggcgttgccgcc
gtcggagtgaaattccgggaggtcatggcgggtctcaaacgccagaaggtaggcggccga
aagtttctccgcgagatgccgtggtatgtcatcatcggcccgcctgcgaccggtaagacc
acagcgctgcggcaatccggattgagctttccgatcgatctcaccgacgaccttcacggc
gttggcggcacgcgcaactgcgattggttctttaccgaggaggcggtgctgatcgatacg
gccggtcgctacgtgcagcaggagagccagccagaggtcgatgcagcggaatggctgggc
ttcctcgatctcttgaagaagcacaggggccgccgtgcgttgaatggcgtcatcgtggcg
ctcggcatagacacgctttcggaagacgatgcggcgatccggatgcatggcaggcagatc
cgcaaacgcttggccgagcttcaggaacgcatcgggatccgcttgcccgtctatctgatg
ctgacgaaagcggacctgataaaaggcttcgagagctttttcggggcgctctcgacggcc
gatcgtgaacaggtgtggggcgtgaccttcccgccgggcgcccgcatcgacggcaccgaa
gtcaccggggaattctcggccttggcgggcgtgctcgaacgacgtctcattccgcgactg
gaaggcgaagagaacctgaccgcccgggcggaaatatttcgtttcccagcccaggtggaa
agcctttcagaacctgttcgtgtgctgatcgagaccgtcttcggcgaaagcaaatatgcg
gaaagcgcctggttgcggggtatctatctgacctccgcgactcaggaaggtacggcagtc
gaccggctgacggcagcattggcatcatccttcggcctgcctgcccaacccgctacacct
atattgcgggccgaaaagcgcagcttcttccttaaagatctgctgacgaaggtcattttc
aaagaggcgggcctcggcaccttcgatccggcggcagaggatcggcgtgtctggatatgg
cgcggtgccgccgtggccgcaacagcattcgtggtcattgccggcctgttattcacgata
tcctaccggaagaacgacgccgccctggcggcgcaggccgaacagctcgaggccctgcag
cttcccctgacgccggttgcggcacgccaagcgccggtcgatccactcgaccttgatttg
gcgctcgaagccgccacggaagtggcgaatgcacggactgagcaaccaggcggaatagca
tccttgataggtccttccgctgaaactgaaattcgccaggcgcagtcggacgcctataac
cgcaccctgcgcaatatattggaaccacgcatggtcgcgctgatcgaggcgacgatgtgg
cgacagatccgcgatcccgagttccagctgggcgcgctgaaaacctatcgcatgatgacc
ggcctgtcgccgatggacccggacttcgccaaacaatggtggacggagaaactgcctgaa
tcggcccccgtgccaccttttaagaccgagatggcagcggatcatcagcttgcagcgatc
gacaacatggcaacggaacaggctttcgtcgctcctgacgaagcgctggtgggcgaagcg
ctccgcacgatctgctcgatcccgctgccggtgcgcgcctatagcgcgctcctctccgat
ccggaggtcacggcgctgaaggaatggatcccggcagatcacgtcggcccgaacggcctg
aaggttctggcacggcgctccgacaagacactgagggtcggcatcagcggtgccttcacc
tatgacgggttccataacgtgatcctaacccggcttgaagacgtcgcaacgcaggccgcg
ctggatcgctcggtttttgccggcggctgctccgaaagcgccagcccgtcggtcgccgcc
ctctcgcaggatatcctcaagctctactatgacgactatatcgccaaatgggacagcttc
atgcgtgacgtgaggcttgcaccgctggccgacctgcagacggccagcgaaaacctcaag
gatctgtccagcgccgattcctcaatgaagcgtctgctgaccgcgatcgtgcgcgagacg
gaactgacccgtcccgaagacgacggcggcggccaggcgcctccgccaggagcatccaag
cttttgtccaagcttggcaagatcggcaaactcgctgccaagggcgtgaagatgatgcct
gcagccggctccaagtcggatgtagatctgtccggcgccctcatttccgagcatttcaaa
cccatcaaggccgccatcgttgaggtcgatggccagcctcccgcactcaatgatgcggtc
gcggccttgaccgcgctgtcgaacatgcttcagaccgtgtcggcaagcccggatgcgcag
gacgccatgaaaagacagggcggcctggcggaactgaccggggcggtggcaaaacaagcc
gtgacccttcccgatccgctcgacgactggctggccggactggcgggcaatacgagcgcg
ctggcaacaggggcggtcacttcagagctcaatgctatctggcgtgccgacgtgctcccc
ttctgccaggcagcgcttaccaaccgctatccgttcgtccccgacagcgccatcgacgtc
aatgtcgtcgatttccagcgcgtcttcggtcccggcgggctgatcgacagctttatcaat
aataatctggtcaactacatcgacacgaccagccatccctggaaatggcgctccgacatc
aagctcgatcccgggcctctggcggcgctggagcaggcgcggctaatccgcgacagcctc
tttccaggaggcgcagggccgatcctgaccttcacgctggagcccaaggatctttcgccg
acagtcagccgcgtgaccttgaatgtcgacggccagagtctctcctacttcaacaacccg
acgcgcccgcaaccgatgacctggcccggcaaggatggaaccggcgtgatcaccctcgcc
ttccagcccctcgacggctcgccggaggtgatggtcagcgagactggaagctgggcgttt
ctacggatgctgcgcgccggtcggctgagcgggacgaatcttgccgagctcttcaagctg
cgccttgctgcccagggctactacgccgatttcgagcttcgcgcggcaagcgtcgccaat
cccttcgacttgaagatgtttgcgaggttctcgtgcccgacgcagctttga

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