KEGG   Rhizobium indigoferae: U5G49_004854
Entry
U5G49_004854      CDS       T09660                                 
Symbol
icmH
Name
(GenBank) type IVB secretion system protein IcmH/DotU
  KO
K11892  type VI secretion system protein ImpK
Organism
rif  Rhizobium indigoferae
Pathway
rif03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rif00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U5G49_004854 (icmH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rif02044]
    U5G49_004854 (icmH)
Secretion system [BR:rif02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U5G49_004854 (icmH)
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: WRW39512
UniProt: A0ABZ1DVU4
LinkDB
Position
pRinCIP108029b:complement(86076..87401)
AA seq 441 aa
MASEDPFGLSGDKGRTRIRPPPSASARQVAAAGTLARRTRSHPNTLISAFAKLLEFAPEL
ESALPPSNPEVLRTRLMEELVAARDAAVASGSPLARADSAAWAVASLLDDLALNTPWGGA
SAWPRQPLVVMLRGDVDAGAQFFARLEELERHPGRDQELLELYYFCLALGFRGKYRVPGR
AGDRSISAVRAAAARFLRDADAEAAPLSPRWEGVAAADEPSRFAVPIWVLALVAVALSTA
IYMLLSMRLDSKAETLATLVRALPPPERAEIYRPEKRTPPPNAPPVEPVIIQLLPEFRAA
APASLLPALKGNENASSVTLLLQSSTPELFQSARPELTKSFEPLVASIAAVLKQNAELIG
GITITGHTDNVPLQASNPLSNNQRLSEARAATIASLLAASGVPTGQLKSQGRAATQPLAG
NDSREGRAANRRIEILIQKRL
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggcaagtgaggatccattcggtctttcgggcgataagggtcgcacacgcatccgcccg
ccgccctcggcgagcgcaagacaggtcgccgctgccggaaccctggcaaggaggacgcga
tctcatccaaacacactgatcagtgctttcgccaagttgctcgaatttgcgccggaactc
gaaagtgcgctgccaccgagcaatccagaagtgctgcgaacgagactgatggaagagctt
gtagcagcccgcgacgctgcggtggcctccggttcgccccttgcgcgggcggactcggct
gcctgggctgtcgcatcgctgctcgacgatctggcgctgaacacgccctggggtggagca
agcgcctggccgcgccagccgctggtcgtcatgctccgcggcgatgtcgatgccggagcg
caattttttgccaggttggaagaattggaacgccatccgggtcgtgatcaggaattgctg
gaactttattatttctgcctggcgcttggttttcgcggcaagtaccgtgtgcctggccgg
gccggcgaccgctcgatcagcgccgttcgcgccgccgcggctcgtttcctgcgtgatgcc
gatgctgaagctgcaccgctctcgcccagatgggagggagttgcggcggccgacgagcca
tcgcgttttgccgtgccgatatgggtccttgccctagttgctgtagcgctgtcgacggca
atttacatgttgctgtcgatgcgactcgatagcaaggctgagacgctcgcaacgctggtg
cgggcactgccgccgcctgagcgggcggaaatataccgccccgagaagcggacaccgccg
ccgaacgcaccaccagtagaacccgtaattatccaattgctaccggaatttcgcgccgca
gcgcctgcttccctgctgccggccctgaagggaaatgaaaacgcctcttccgtcacgctt
cttttgcagtcaagcacaccggagcttttccagtccgctagacccgaattgacgaagagc
tttgaacccctcgttgcttccatcgcagcagttctcaagcagaatgccgagctgatcggc
ggcattaccatcaccgggcacactgataatgtcccgctgcaagcgagcaacccgctgtcc
aacaaccagcgcctctccgaggcccgcgcagcaacgattgcctcattgctggccgcctcc
ggcgtgccgaccgggcagttgaaatcgcaaggacgcgcggcgacacagccacttgccgga
aacgacagccgcgagggtcgggccgccaaccgccgcatcgaaatccttattcaaaagagg
ctctga

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