KEGG   Rhizobium indigoferae: U5G49_004859
Entry
U5G49_004859      CDS       T09660                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
rif  Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:rif00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rif02044]
    U5G49_004859 (tssF)
Secretion system [BR:rif02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U5G49_004859 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WRW39517
UniProt: A0ABZ1DW83
LinkDB
Position
pRinCIP108029b:complement(91506..93380)
AA seq 624 aa
MDRVFLEYYEEELTHIRALAAEFAHMHPSIARNLSLDTIPCPDPFVERLLDGVAFLAART
RQKVDAESMRYVRSVLENFYPDLVSPAPATAMALLKPGQQVQTMLAGHLLKRGTRLVSSV
RPGISTRSIFTTVQDVTLWPLAISSVTYIQDRSALAAAGIGAIDGVAGASGLSITINRTG
KGKFADLSLDRLDFYFSEKSKAPLLFDTLFGACSGVGARPEGRDNPLSPLPAPEMVGISD
DEALMPRTRETFEGYRLLREYFIAPERFHYARVTGMRPVVRRCSERLELVFLLRRPVPEL
AGLTAKDLELFATPIINLFERSCSVIELNPRRTRQVLHADRTRPRDFEIYRAVRVEDADA
EGSDAEIPALFSLGQNRTNGWVYFTERRPRRPSEDELRQGQTRTSYVGDDVFISLSRPAQ
SKAGRPLKRIEVTALCTNRDLPILDDTPSLTLESGDPVETVQLLGALRQPWPAIPATLPA
GAAEASRADELAWRFIAQLSLNFLSLAEEGRGVDPLHALLDLYAQRGDPSLSRHVRAIAR
VEARPLIERLPIAGPMCFARGSDITLHVDQSVLAGHSSLLLTALLARLFARYAAINGFVR
TRARILQKQEDVLWPITPGSRFLI
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggatcgggtcttccttgaatattatgaggaggaactcacccatatccgtgcgcttgcc
gccgagtttgcccatatgcacccctcgatcgcgcgcaatctttctctggataccattccg
tgtcccgacccctttgtcgaacggcttcttgacggcgtcgcatttctggccgcccgcacc
cgccagaaggtcgacgcagaaagcatgcgatatgtccgcagcgtgctcgaaaatttctat
cccgacctcgtctcgccggcgccagcaacggccatggccttgctgaagccaggccagcaa
gttcaaaccatgcttgccggtcacctattgaagcggggaacacggctcgtttcgagcgtc
cgacctggaatttcgacaagatccatcttcacgacggttcaggacgtgacgctctggccg
cttgcaatcagctccgtgacctacatacaggaccgaagcgcacttgcggcggcggggata
ggcgccattgacggggttgccggcgcgtccggattgagcatcaccatcaatcgaaccggc
aagggcaagttcgccgacttatcgctcgatcgcctggacttttatttcagcgaaaagagc
aaggcgccgttgctcttcgatacactatttggcgcctgcagtggagtgggcgcgcgcccg
gaggggcgcgacaatcccttgagcccgctgcccgcgcccgagatggtcggcatatcggac
gacgaggcgctcatgcctcgcacgcgcgaaacttttgagggctaccggcttctgcgcgaa
tattttatcgctcccgagcggtttcactatgcgcgtgtgacggggatgcggccggtcgtt
cgccgttgcagcgagaggctggaactggtcttcctgcttcgccggcccgttccggagctt
gcaggcctcaccgcgaaggatctggagcttttcgcaacgccgatcatcaacctgttcgag
cgctcctgcagcgtcattgagctcaatccgcggcggacccggcaggtcctccacgccgat
cggacgcggccgcgcgatttcgaaatctatcgcgcggtgcgtgtggaggatgccgatgcc
gaaggctccgatgccgagataccagcactttttagtctcggccagaaccgcacaaacggt
tgggtctattttacagaacgtcgcccacggcgtccgagcgaggacgagcttcgtcaggga
cagacccgcacatcctatgtcggagacgacgtcttcatctccctctcacgcccggcgcag
tcgaaagcggggcgaccgctcaagcggattgaggtgacggcgctttgcaccaaccgggac
ttgccgatactggacgacacgccctccctaacgctcgaaagcggtgatcctgtcgagacc
gtgcaattgcttggcgcgctacgccagccctggcctgccatcccggcaacgctaccggcc
ggcgctgccgaggcctcaagagccgatgaactcgcctggcgctttattgcacaattgtcg
ctgaactttctcagcctggcggaggaaggccgcggggtcgaccctcttcacgccctgctc
gatctttatgcgcagcggggagatccaagcctctcgcgacatgtacgcgccattgcgcgg
gtcgaggcccggcctctcatcgagcgcctgccgatcgctggcccgatgtgctttgcccgc
ggcagcgacatcacgctccatgtcgaccagtcggtgcttgccgggcacagcagtttgttg
cttacggcgctgctcgcgaggctttttgcccgctacgcggcgattaacggattcgtgcgc
acaagggcgcggatcctgcagaaacaggaggatgtgctatggccgataacgccgggcagc
cgcttcctgatctga

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