KEGG   Rhizobium indigoferae: U5G49_004862
Entry
U5G49_004862      CDS       T09660                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
rif  Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:rif00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rif02044]
    U5G49_004862 (tssC)
Secretion system [BR:rif02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U5G49_004862 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 TssC
Other DBs
NCBI-ProteinID: WRW39520
UniProt: A0ABZ1DTG7
LinkDB
Position
pRinCIP108029b:complement(94600..96108)
AA seq 502 aa
MAEQERTAAVDVKEAEGVDLQEFSDLLEKDFKVKKDDSDKLQTLVQNLALAARARSQSTT
ISSNAIKSIKSLISGIDKLLTEQVNEVLHAPEVLQLEGTWRGLWYLVNNTETDQKLKIRV
MNISKEALADTLEDYEGQMWDQSPIFKKVYTDEYSMLGGSPYGCLIGAYEFSNHPKDVAL
LRNMSGICASAHTPFIAAAAPRLFRMESWQELPNPQDLQQIVSSPAYASWQSLRESEDAR
YIGLTMPRVLARLPYGAETIPVKGFAFEEDVQGNHQRYVWMNAAFPMGVNINRSHKLFGW
GTQIRGVENGGAVINLPVHNFPTDDGTVAMKCPTEVAIDDRREAELAKLGLMPILHRKNT
DIAAFIGAHSLQDDETRAGRLVDPDAQANERLSANLPYLFPVSRFAHYLKAIARDKIGSF
KERSDMQIWLTEWINRYVLANPAFADDKARAKRPLAAAEVQVDSVEGRPGWYNARFYLRP
HYQLEGINASLRLVSELPSTKT
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggccgaacaggaaagaaccgccgctgttgacgtcaaggaagccgaaggcgtcgatctt
caggaattcagtgatcttcttgaaaaggacttcaaggtcaagaaggatgacagcgacaag
ctgcaaaccctggtgcagaatctcgcgcttgcagcgcgcgctcgctcccagtcgactaca
atttcctcgaatgcgatcaagtcgatcaaatccctgatctcgggcatcgacaagctcctg
accgagcaggtcaacgaagtcctccatgcgcccgaagtgctgcaactcgagggaacatgg
cgcggtttgtggtatctcgtcaacaataccgagacggatcagaaactgaagatccgcgtc
atgaatatttcaaaagaagccttggccgacacgctcgaagactacgagggtcagatgtgg
gatcaaagtcccatattcaagaaagtctatacggacgaatattccatgctcggcggcagc
ccgtacggctgcctgatcggtgcctacgagttctccaaccacccgaaggacgtcgctctc
cttcgcaacatgtccggcatctgcgcgtctgcgcacacgcccttcattgcagccgccgcc
ccgcgactcttccgcatggaaagctggcaggaactgccaaaccctcaggacctgcaacag
attgtctcgtcgcccgcctacgcctcctggcagtcgctgcgagagagcgaggatgcgcgg
tacatcggcctgacgatgccccgggtccttgcgcgcctgccctatggcgcggaaaccatt
ccggtaaagggcttcgcctttgaggaggatgtccagggcaatcatcagcgctacgtgtgg
atgaacgccgccttcccgatgggtgtcaatatcaatcgaagccacaagctatttggatgg
ggcacgcaaatccgcggtgtcgagaacggtggcgcggtcatcaatcttccagtccacaat
ttcccgaccgacgatggtactgtcgcgatgaaatgcccgacggaggtcgccatcgacgat
cgccgcgaggcagagcttgccaagcttgggctcatgccgatcctgcatcgcaagaacaca
gacatcgccgccttcatcggtgcgcactcgctacaggatgacgagacgcgcgccgggcgc
ctggtcgatccggatgcacaggccaatgagcgcctgagtgcgaatctgccgtatcttttc
ccggtttcgcgtttcgcccattacctgaaagcaatcgcccgcgacaagatcggttcgttc
aaggagcggtccgacatgcagatctggctgacggagtggatcaatcgctacgttcttgcc
aaccctgcctttgccgacgacaaggcccgcgccaaacggccgctggctgcggccgaggtt
caggtcgacagcgtcgaaggccgcccgggatggtataatgcccggttttatctgcgcccc
cattatcagttggaaggcatcaatgcgtcactgcgtctcgtatcggagttgccgtcgacg
aagacctga

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