Rhizobium indigoferae: U5G49_004915
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Entry
U5G49_004915 CDS
T09660
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rif
Rhizobium indigoferae
Pathway
rif02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U5G49_004915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_004915
Transporters [BR:
rif02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
U5G49_004915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WRW39572
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All DBs
Position
pRinCIP108029b:155596..157140
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AA seq
514 aa
AA seq
DB search
MHKLLLAGTMLMAMTGMVDARDIVVAQSSDLRSANPGVNRDGNTDGVILHIVEGLVGYAN
NGEVKPLLAKSFEVSADGLTYSFKLRDDVKFHNGKKLTADDVVWNWNRYLKPETKWTCLP
DFDGSGSVHVTGVKAVDTSTVTITLEKPSAIFLGLMSRPECGYTGMISPESVGADGSFIK
PIGTGPFKWDEWKKGEYIHLAKFDDYVSPQNDGKPDGMVGSKRPLVDGIKFMVIPDASTV
KAGLQSGVLDTAEISPDLIPEFKTSDTMQLIVARNNGKNLFYIQTRDKVLSNPGVRRAMA
MALDLDQLVEAASNGTGAANGSMVSEDSLYFDDVQKTRLPYDLETAKKELAAAGYKGEPI
TIIANKRSNVPSFPAAVMAQAMMQQAGLNVQIEVLDYATQVDRRRSGNYQIISQSVAPRL
DPALMYGFYVGNKDKNASLMWDDPKAVELMKAAYAESDQTKRQAIFDEFHTLMLKEMPGI
FLYDMVDVWGATKKLKGQPVWQSNARLWEVSLDN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcataagcttcttcttgcagggaccatgttgatggcgatgaccggcatggtcgacgcc
cgcgacatcgtcgtggctcaaagctccgatctgcgcagcgccaatccaggcgtcaatcgc
gacggcaataccgatggcgtcatcctgcatatcgtcgaagggctcgtcggctatgccaac
aacggcgaggtcaagccgctgctggcaaagagcttcgaagtctcggctgacgggctgacc
tatagcttcaaactgcgtgacgacgtcaaatttcacaacggcaagaaattgaccgccgat
gacgtcgtgtggaactggaaccgctatctcaagcccgaaacgaaatggacctgccttcct
gatttcgacggcagcggcagcgtgcatgttacgggggtcaaggcagtcgatacttcgacg
gtcactatcacgctggaaaagccatccgcgattttccttggcctgatgtcgcgccccgaa
tgcggttataccgggatgatttccccggaatcggtcggtgcggacggaagcttcatcaaa
ccgatcggcaccggtcccttcaaatgggatgaatggaagaagggcgagtatatccacctt
gccaagttcgacgattatgtctcgccccagaacgacggcaagcccgacggcatggtcggc
tccaaacgccctctcgtcgatggcatcaagttcatggtcattcccgatgcttcgaccgta
aaggccggccttcagtctggcgtactcgatacggcggagatttcgccggatctcattccc
gaattcaagacgagcgacacgatgcaactgatcgtggctcgcaacaacggcaaaaacctc
ttctacatccagacgcgcgacaaggtgctgagcaatcccggcgtgcgccgcgccatggcg
atggcactcgatctcgaccagctcgtcgaggccgcctctaatggcaccggcgcagccaac
ggctcgatggtttcggaagactcgctctatttcgacgatgtccagaagacccgtctgccc
tatgacctcgagaccgcgaagaaggagcttgcggcggccggctacaagggcgagccgatc
accatcatcgccaacaagcgcagcaacgtgccaagcttcccggccgctgtgatggcgcag
gccatgatgcagcaggcaggtctcaatgtgcagatcgaggtgctcgactatgcgacgcag
gtcgatcgtcgccgctccggcaactatcagatcatctcgcagtcggtcgcgccaaggctc
gatccggcgctgatgtacggcttctatgtcggcaacaaggacaagaacgcttctttgatg
tgggatgacccgaaagccgtcgagttgatgaaggccgcctatgcggagtccgaccagacg
aagcgtcaggcgatcttcgacgagtttcacacgctgatgctcaaggaaatgcccggcatc
ttcctctacgacatggtcgatgtctggggcgcgaccaagaagctgaagggtcagcccgtc
tggcaatcgaatgcccgtctttgggaagtttcgctcgacaattga
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