Rhizobium indigoferae: U5G49_004942
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Entry
U5G49_004942 CDS
T09660
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rif
Rhizobium indigoferae
Pathway
rif02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U5G49_004942
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_004942
Transporters [BR:
rif02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
U5G49_004942
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WRW39599
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All DBs
Position
pRinCIP108029b:complement(182315..183841)
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AA seq
508 aa
AA seq
DB search
MKTLVAFLLGTALVALPSTLLAQEKGGVINVATIGEPPTLDPMSSTADLVGIVTQHIFET
LYTFDKSWNVTPLLAESLPEISADGKTYTIKLRTGIKFHDNTDMTSEDVVASLGRWMKIA
SRGKQVAGFIDKVTAVDPATVTITLKQPYAPLTSLLAFNNSAAIIIPSEKQDEPMKEFVG
TGPYMLKERKADQYIQLVRFDGYKSREGDSNGYGGARHQYLDEIRFVPVPDPNTRVEAAI
SGQYDYVDSIPVESYDKLKASTASQPIILKPFGYPVFVFNTADGINKNVEVRKAIRQALS
MEDMLAAAFGSKDFYALDGAIYPKTFAWSTDAGVEGAYNVADPEGAAAAAKKAGYNGEPI
RILTSRQYEFHYKMAQVAAEYLKLAGFTVDMQVVDWATLTQRRTDPKLWDIYITHSPFLP
EPALIGSLSTSSPGWWDTPARKAAVDAFTSEVDPKKRVALWADVQKAVYADAPFMKIGDF
NAVSAESTKLEGVDPAPWPYFWNASIKK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattggtcgcattccttctcggcactgcgctcgtcgccctgccttcgacgctc
cttgcccaggaaaagggcggcgtcatcaacgttgcgacgatcggtgagccgccgacgctc
gatccgatgtcgtcgacggccgatctcgtcggcatcgtcacgcagcacattttcgaaacg
ctctacacctttgacaagagctggaacgtcacgccgcttctggccgaaagcctgcctgag
atcagcgccgacggcaaaacctatacgatcaagctcaggaccggcatcaagttccacgac
aataccgacatgacctcggaagatgtcgtcgcctcgcttggccgctggatgaagattgcc
tcgcgcggcaagcaggtggccggcttcatcgacaaggtcaccgcggtcgatccggcgacc
gtcacgatcacgctgaagcagccctatgcgccgctgacctcgctgcttgccttcaacaat
tcggcggcgatcatcatcccgtccgaaaagcaggacgagccgatgaaggaattcgtcggt
accggtccctatatgctgaaggagcgcaaggccgaccagtatatccagctcgtccgcttc
gacggctataagtcccgcgaaggcgacagcaacggttatggcggcgcccgccatcaatat
ctcgatgagatccgcttcgtgccggtgccggatccgaacacccgcgttgaggccgctatt
tccggccagtatgattatgtcgactcgatcccggtggaatcctacgacaagctgaaggcc
tccaccgcctcgcagccgatcatcctcaagcccttcggttatccggtcttcgtcttcaac
acggccgatggcatcaacaagaatgtcgaagtccgcaaggcgatccgccaggcgctcagc
atggaagacatgctggccgcggctttcggcagcaaggatttctacgcgctcgacggcgcc
atctatccgaagacctttgcctggtcgacggatgctggcgtcgagggcgcctataacgtc
gccgatccggaaggggcggccgctgccgccaagaaggccggttacaacggcgaaccgatc
cggattctgaccagccgccaatacgagttccattacaagatggcgcaggtcgccgccgaa
tatctgaagcttgccggcttcaccgtcgatatgcaggttgtggactgggcgacgctgacg
cagcgccgcaccgatccgaagctctgggatatctacatcacccatagcccgttcctgccg
gagccggccctcatcggctcgctctcgaccagctcgccgggctggtgggatacgccggcc
cgcaaggccgccgtcgatgccttcacttcggaagtcgatccgaagaagcgtgtggcgctc
tgggccgatgtccagaaggccgtctatgccgacgcacccttcatgaagatcggcgacttc
aacgccgtttcggcagaatcgaccaagctcgaaggcgtcgatccggctccgtggccgtat
ttctggaatgcttcgatcaagaagtaa
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