Rhizobium indigoferae: U5G49_004991
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Entry
U5G49_004991 CDS
T09660
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
rif
Rhizobium indigoferae
Pathway
rif02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U5G49_004991 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_004991 (rhaS)
Transporters [BR:
rif02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
U5G49_004991 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WRW39648
LinkDB
All DBs
Position
pRinCIP108029b:239092..240087
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AA seq
331 aa
AA seq
DB search
MKLAKKLAIGVAFAVAMMAGTASAADIKIGLVVKSLGNGFFDAANKGAQEAAKELGGVEV
IYTGPTTTTAEGQIEVINSLIAQGVSAIAVSANDPDALVPALKKATQRGIKVISWDSGVA
PEGRILQLNPSSNELIGKMCLTLVKDHLDGGKGDFAILSATTTSTNQNIWIDQMKKQLKD
FPGLNLVTTVYGDDLSDKSYREAEGLLKANPNIKVIVAPTTVGVLAASKVVEDKGLVGKV
YVTGLGLPSEMAGAIKSGATKEFAIWNPIDLGYSATQIAYRLVKGETDGKPGSEIEAGRM
GKIKVGDNGEAAMADPFVYNATNIDQFSKVF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcaaagaaactcgcaatcggcgtggcatttgccgtcgccatgatggccggc
acggcaagtgctgccgacatcaagatcggtctcgtcgtcaagtcgctcggcaacggcttc
ttcgatgctgccaacaagggcgcgcaggaagcggccaaggaactcggcggcgtcgaggtc
atctataccggtccgaccacgacgacggccgaaggccagattgaagtcatcaactcgctg
atcgcccaaggcgtcagcgccatcgcggtttcggccaacgatcccgacgcgctcgttccg
gcgctgaagaaggctacacagcgcggcatcaaggtcatctcctgggattccggcgtcgcg
cctgaaggccgtatccttcagctcaacccgtcgtccaacgagttgatcggcaagatgtgc
ctgaccctcgtcaaggaccatctcgacggcggcaagggtgacttcgccatcctgtcggca
acgaccacctcgaccaaccagaacatctggatcgaccagatgaagaagcagctcaaggat
ttcccaggcctcaacctcgtcaccacggtctatggcgacgacctctcggacaagtcctat
cgtgaagccgagggcctcttgaaggcgaacccgaacatcaaggtcatcgtcgctccgacg
acggtcggcgttctcgccgcgtcgaaggtcgtcgaagacaagggccttgtcggcaaggtc
tacgtcaccggccttggcctgccgtccgaaatggccggcgcgatcaagtcgggcgcgacg
aaggaattcgccatctggaacccgatcgatctcggctactccgcaacgcagatcgcctat
cgcctcgtcaagggcgagaccgacggcaagccgggcagcgagatcgaggccggccgcatg
ggcaagatcaaggtcggcgacaacggcgaagccgccatggccgatcccttcgtctacaac
gctacgaacatcgaccagttctccaaggtcttctga
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