Rhizobium indigoferae: U5G49_005042
Help
Entry
U5G49_005042 CDS
T09660
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rif
Rhizobium indigoferae
Pathway
rif03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U5G49_005042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rif03400
]
U5G49_005042
Enzymes [BR:
rif01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
U5G49_005042
DNA repair and recombination proteins [BR:
rif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U5G49_005042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WRW39698
LinkDB
All DBs
Position
pRinCIP108029b:296240..296881
Genome browser
AA seq
213 aa
AA seq
DB search
MNIAASVGPALALEVADAASIAELRHQAEGCTRCDLYRNATQIVFGEGSVKAEIVFIGEQ
PGDQEDLTGRPFVGPAGQLLDRCLEEAGLDRQRCYVTNAVKHFKFTPRGKRRLHSKPNAG
EIMRCAWWLGAELNILQPKLIVTLGASALYAVLGPKVKLTPQRGHILHPTNRPPVLVTIH
PSYLLRIRDEAERRRQRRDFVSDLHRAGEFRPQ
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagccgcaagtgtcggccctgccttggcgctcgaagtcgcggatgccgcaagc
attgccgaactccggcatcaggcggaaggctgcacccgttgtgatctctataggaatgcc
acgcaaatcgtcttcggcgaaggttctgtgaaagccgagatcgtcttcatcggagagcag
ccgggcgatcaggaggatctgaccggcaggcccttcgtcggtcccgccggccaactgctc
gatcgctgcctggaagaggccggtctcgaccggcagcgctgctatgtcaccaatgccgtc
aagcacttcaagttcacgccgcgcggcaaacggcggctgcattcaaaaccgaatgccggc
gagatcatgcgttgcgcctggtggctcggcgccgaactcaacatcctgcagccgaaactt
atcgtgacgctcggcgcaagcgcactttatgcggtgctcgggccaaaggtgaagctgacg
ccgcagcgcggccatatcctgcatccgacaaaccgtccacccgttctggtcaccatccac
ccctcctatctcttgcgcatccgcgacgaggcggagcggcgccggcagcgccgggatttc
gtgtcagatctgcacagggcgggggagtttcggccccaatga
DBGET
integrated database retrieval system
