KEGG   Rhizobium indigoferae: U5G49_005337
Entry
U5G49_005337      CDS       T09660                                 
Name
(GenBank) VirB4 family type IV secretion system protein
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
rif  Rhizobium indigoferae
Pathway
rif03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rif00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U5G49_005337
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rif02044]
    U5G49_005337
Enzymes [BR:rif01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     U5G49_005337
Secretion system [BR:rif02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   U5G49_005337
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 FtsK_SpoIIIE ATPase_2 AAA_16 T2SSE TrwB_AAD_bind NPHP3_N AAA_7 ABC_tran PIF1 SLFN-g3_helicase TraC_F_IV
Other DBs
NCBI-ProteinID: WRW38325
UniProt: A0ABZ1DTN6
LinkDB
Position
pRinCIP108029d:complement(29018..31384)
AA seq 788 aa
MPSIATLRSRELGPETFIPHVRHVDETTIALESRALMVMLALDGISFETTDVLDLNSLHR
DLNTLYRNIADERLALWTHVIRRRDNDYPGGEFANSFSQGLNARYRQRMIGEDLFRNDLY
LSLVWHPGRDPAEKAANFLSRLRRARRNCVEVDGDALKHLQDKVSDVTAGLKRFEPRVLT
LYEQDDIIFSEPSEVLHQIVGGRRERVPLTEGRISSAIYSDRVIFGRETIEIRHEAESRY
AGIFGFKEYPATTRSGMLDGILTAPFELILTQSFAFVSKADARTIMGRKQNQMVSAGDKA
ASQIEELGDAMDDLESNRFVLGEHHLALSVFAPSVKELADHMAKARAYLTNGGAVVARED
LGLEAAWWGQVPGNFRYRARSGAITSRNFAALAPYHSYPTGKKDGNEWGPAVAMLKTASG
SPFYFNFHHSDLGNTFVCGPSGTGKTVLLNFMLSQLEKHDPHMVFFDKDRGADLFVRAAG
GTYLPLRNGVATACAPLKALELTPENKVFLARWVGQLVGSAKRELTVLELRDIASAIDGL
ADLPVERRSIGALRTFLNNTDPEGIASRLRRWERGGPLGWVFDNETDDIGIGARFIGYDM
TDFLDNEEIRTPLMAYLFFRIEQLIDGRRIIIVIDEFWKALQDEGFRDLAQNKLKTIRKQ
NGLMLFATQSPRDAIVSPIAHTIIEQCPTQIFLPNPRGDHADYVDGFKLTEREFELLSRE
LSVESRRFIVKQGHNSVVAELNLTGFDDELDILSGRTANVELAEAIRAEIGDGLEDWLPV
FQQRRRTD
NT seq 2367 nt   +upstreamnt  +downstreamnt
ttgcctagcatcgcaacgctccgctcgcgtgaactcgggccggaaaccttcattccgcac
gtccgtcatgtcgatgagacaacgatcgcactcgaatccagggcgctgatggtgatgctc
gcgctcgatggcatatccttcgagactaccgatgtcctcgatctcaacagtctgcaccgg
gacctcaatacgctctatcgcaacatcgccgacgagcgcctggcgctctggacacatgtc
attcgccgtcgcgacaacgactatccgggcggagagttcgccaattctttctcgcagggg
ctgaatgcaagataccgccaacgcatgatcggagaggatctgtttcgaaacgacctttac
ctctcgcttgtctggcatccgggccgggatccggccgaaaaagcagccaacttcctttcg
cgcctgcgcagggcgcgccgcaactgcgtcgaagtcgacggggatgccctgaagcacctg
caggacaaagtatccgacgtgaccgcagggctgaaacgcttcgagcctcgggtgctgacc
ctctacgagcaggacgacatcatcttctccgaaccgagcgaggtcctgcatcagatcgtc
ggcggccggcgagagcgcgttccgttgacggagggccggatatcctcggcgatctattcc
gatcgggtgatcttcgggcgcgagaccatcgagatccgtcatgaggccgaaagccgctat
gccggcatattcgggttcaaggaatatccggcgacgacccgcagcggcatgctcgacggc
atcctgacggcgccgttcgagctcatcctgacgcagtctttcgcattcgtctcgaaagca
gatgcgcgcacgatcatggggcgcaaacagaaccagatggtgagcgccggcgacaaggcg
gcgtcgcagatcgaagagctcggcgatgccatggacgaccttgaatcgaaccgctttgtg
cttggagagcaccatctggcgctgtcggtctttgcgccttcggtgaaggagcttgccgac
cacatggcgaaagcacgcgcctatctcaccaacggcggggcggtcgtcgcccgcgaggat
ctcgggctcgaggcggcctggtgggggcaggtgccgggcaatttccgctatcgcgcaaga
tcgggcgccatcacgtcgcgcaattttgcagcgctcgccccctatcattcctaccccacc
ggcaagaaagacggcaacgaatggggaccggccgtcgccatgctgaagactgcctccggc
tcgcccttctatttcaatttccaccatagcgaccttggcaacaccttcgtctgcggcccg
tcgggcaccggcaagacggtgctcttgaacttcatgctctcccagctcgaaaaacatgat
ccccacatggtcttcttcgacaaggatcgaggagctgacctcttcgtgcgggccgcgggt
ggcacttacctgccgcttcgaaacggtgttgccaccgcctgcgcgccgttgaaggcactt
gaactcacgccagagaacaaggtgttcctcgcccgctgggtcggccagctggtcggatcg
gcaaagcgcgaactgacggtcttggagctgcgtgacatcgcctcggccatcgatggcctg
gcggacctgccggtcgaaagacgctcgatcggcgccttgcgcactttcctcaacaacacc
gatcccgaaggcatcgcctcacggctcaggcgctgggagagaggagggccgctcggctgg
gtgttcgacaacgagaccgatgacatcgggatcggcgccaggttcatcggatacgacatg
accgacttcctcgacaacgaggaaatccgcaccccgttgatggcctatctgttcttccgc
atcgagcagctgatcgacgggcggcgcatcatcatcgtcatcgacgagttctggaaggcc
ctgcaggacgaaggttttcgcgatctcgcccagaacaagctgaagacgatccgcaagcag
aacggcctgatgttgtttgcgacccaaagcccgcgcgatgcgatcgtctcgccgatcgcc
cacacgatcatcgagcagtgcccgacgcaaatctttctgcccaatccgcgcggcgaccat
gccgactacgtcgacgggttcaaactgacggagcgcgagttcgagcttctctcccgcgaa
ctttcggtcgagagccggcgcttcatcgtcaagcagggtcacaacagcgtcgtcgctgaa
ttgaacctcacgggtttcgacgacgaactcgacatcctgtcaggccgcaccgcgaacgtc
gaactcgccgaggcgatccgggcggagatcggcgacgggctcgaagactggctaccggtg
tttcagcaaagaaggagaacagattga

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