Rhizobium indigoferae: U5G49_005905
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Entry
U5G49_005905 CDS
T09660
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rif
Rhizobium indigoferae
Pathway
rif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U5G49_005905 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rif03019
]
U5G49_005905 (groL)
03110 Chaperones and folding catalysts [BR:
rif03110
]
U5G49_005905 (groL)
03029 Mitochondrial biogenesis [BR:
rif03029
]
U5G49_005905 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rif04147
]
U5G49_005905 (groL)
Enzymes [BR:
rif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
U5G49_005905 (groL)
Messenger RNA biogenesis [BR:
rif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
U5G49_005905 (groL)
Chaperones and folding catalysts [BR:
rif03110
]
Heat shock proteins
HSP60 / Chaperonin
U5G49_005905 (groL)
Mitochondrial biogenesis [BR:
rif03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
U5G49_005905 (groL)
Exosome [BR:
rif04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
U5G49_005905 (groL)
Exosomal proteins of other body fluids (saliva and urine)
U5G49_005905 (groL)
Exosomal proteins of breast cancer cells
U5G49_005905 (groL)
Exosomal proteins of colorectal cancer cells
U5G49_005905 (groL)
Exosomal proteins of bladder cancer cells
U5G49_005905 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WRW38879
LinkDB
All DBs
Position
pRinCIP108029d:653878..655506
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEIKFSTEAREKMLRGVDILANAVKATLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVTSGMNPMDLKRGI
DLAVAAIVAELKANARKISNNSEIAQVGTISANGDAEIGRFLAEAMEKVGNDGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNADKMRVEFEDPYILIHEKKLSNLQSMLPVLEAV
VQSSKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTAGTV
ISEDLGIKLESVTLDMLGRAKKVSIEKENTTIVDGSGAKSDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALL
RAVKALDAVKTANGDQRVGVDIVRRAVEAPARQIAENAGAEGSVIVGKLREKSEFSYGWN
AQTGEYGDLYAQGVIDPAKVVRTALQDAASIAGLLVTTEAMIAEKPKKDAPPPMPAGPGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaaatcaaattcagcaccgaagcccgcgagaagatgttgcgtggcgtc
gacatcctggccaacgccgtgaaggcgaccctcggcccgaagggccgcaacgtcgtgatc
gacaagtcgttcggcgccccgcgcatcaccaaggacggggtttcggtcgccaaggaaatc
gaactcgaagacaagttcgagaatatgggcgcccagatggtccgcgaagttgcttcgaag
accagcgacattgccggcgacggcaccaccaccgcaacggtgctggcccaggcgatcgtc
aaggagggcgccaaggcagttacctcagggatgaacccgatggacctgaaacgcggcatc
gatcttgcggtcgccgccatcgtcgcggaactgaaggccaatgcccgcaagatctcaaac
aattccgaaatcgcccaggtcggcacgatctccgccaatggcgatgccgaaatcggccgc
tttttggcggaagccatggaaaaggtcggcaatgatggcgtcatcaccgtcgaagaagcc
aagaccgccgaaaccgaactcgaagttgtcgaaggcatgcagttcgatcgcggctatctc
agcccctacttcgtgactaatgccgacaagatgcgggtggagttcgaagacccttatatc
ctcatccacgagaagaagctctcgaacctgcagtcgatgctgccggttctcgaagccgtc
gtccagtccagcaagccgctgctcatcatcgctgaagatgtcgaaggcgaagccctggca
accctcgttgtcaacaagctgcgcggtggcctcaagatcgctgccgtcaaggcgcccggc
ttcggcgaccgccgcaaggccatgctcgaagacatcgccatcctgaccgccggcaccgtc
atctccgaagatctcggcattaagcttgaatccgtcacgctcgacatgctcggccgagcc
aagaaggtgtcgatcgagaaggagaacaccacaatcgtcgacggttcgggcgccaagtcc
gacatcgaaggtcgtgtggcccagatcaaggcccagatcgaagagaccacatccgactat
gaccgagagaagctgcaggaacgtcttgccaagctcgcgggcggcgttgccgtcatccgc
gtcggcggctcgacggaagtcgaagtgaaggagaagaaggatcgcgtcgacgacgcgctt
catgcaacccgcgcggcggtcgaggaaggcattctgccgggcggcggtgtggcgctgctg
cgcgccgtcaaggcgctcgacgccgtcaagaccgccaatggtgaccagcgcgtcggtgtc
gacatcgttcgccgcgcggtcgaggcgccggctcgccagatcgccgaaaacgccggggcg
gaaggctcggtcattgtcggcaagctgcgcgagaaaagcgagttctcctacggctggaac
gctcagacgggcgaatatggcgacctttatgcacagggcgtcatcgatccggccaaggtg
gttcgcaccgcgctgcaggatgcggcctccatcgccggcctcctcgtcacgacggaagcc
atgatcgccgagaagcccaagaaggacgcgccgccgccaatgcccgccggccccggcatg
gacttctaa
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