Rhizobium indigoferae: U5G49_006388
Help
Entry
U5G49_006388 CDS
T09660
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rif03000
]
U5G49_006388
Transcription factors [BR:
rif03000
]
Prokaryotic type
Helix-turn-helix
GntR family
U5G49_006388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
UTRA
HTH_DeoR
HTH_Crp_2
Rrf2
HTH_11
LexA_DNA_bind
Fe_dep_repress
HTH_12
TrmB
Motif
Other DBs
NCBI-ProteinID:
WRW39318
LinkDB
All DBs
Position
pRinCIP108029d:1111651..1112373
Genome browser
AA seq
240 aa
AA seq
DB search
MSLIRNNPVAMYLQIADRLRAEITEGAYEPSGQLPSESQIMARFTVSRVTVRLALQQLDR
DGLIERRKGKGTFVAGKQVRHQIDTLRSFHESLKVQGFDATMRIVELTAIETPSAFIPLF
GTTCALLERLHVVNDEPIALGRSFLPAFMSELEREIAEQQPTYALLKDKAGADIVSAEIA
IGARAVPPRITSLIGAAENAILLVLERSSYFETGACAEKSEFFIRPERYQFVLGSRMPDR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcatacgcaataacccggtggctatgtacctgcagatcgccgatcggcttcgt
gccgagatcaccgaaggcgcctacgagccgtctggacagctcccgtcggaatcgcaaatt
atggcacgcttcacagttagtcgcgtcaccgtgcggctggcgctccaacaactcgatagg
gatgggctgatcgaacgccggaaaggcaaaggcactttcgtggccggcaagcaggtgcgc
catcaaattgatacactgcgtagctttcatgaatcgctgaaagtccaaggcttcgatgct
acgatgcggattgtcgagttgaccgcaattgagacaccgtctgctttcatcccgctgttc
ggaacgacatgcgcacttctggaacggcttcatgtggtgaacgacgagccgattgcattg
ggccgaagcttcttgccggcattcatgtcggagctggagcgagagatcgccgaacagcaa
ccaacttatgcgctacttaaagacaaagccggcgccgacattgtctccgctgagattgcg
atcggagcgcgtgctgtcccgcctcggataacgtcgctgattggagcggctgaaaatgcg
atcctgcttgttctggaacggagttcctatttcgaaacgggcgcttgcgccgaaaagtct
gaattttttattcgaccagagcggtaccaatttgtcctcggcagtcgaatgccggaccgc
tga
DBGET
integrated database retrieval system
