Rhizobium indigoferae: U5G49_006396
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Entry
U5G49_006396 CDS
T09660
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rif
Rhizobium indigoferae
Pathway
rif02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U5G49_006396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_006396
Transporters [BR:
rif02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
U5G49_006396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WRW39326
LinkDB
All DBs
Position
pRinCIP108029d:1120235..1121842
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AA seq
535 aa
AA seq
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MDIRRRQLNQILALSALSAILPFRDFAQAAEPVAGGTLNLLVQPEPPTLVTLAHTAGPTT
RVSGKVTEGLLAYGLDFMPIPQLATEWDLSDDGLEYSFKLREGVKWHDGKDFTSEDVAFS
ILALKEVHPRGRATFSSVKEVATPDPHTAIIRLSKPAPYLIGALQASESPIVPKHVYDGT
KDFAAHSNGRAPIGTGPFIFREWAVGSHIILDRNPDYWDKGKPYLDRIVIKFIPDASARL
AALETGEVDIAPDTPVSLSEIDRLKASATLAVDDRGNDYSPTVYRIEFNLANDYFKHDKV
RQAVAHAIDRQKIADIAFYGYAVPAPSPISPFLKAFYNPNVPVYAYDPAKAEELLDEAGF
PRGADGIRFEVPHDVMPYGDTYTRIGNYLRDALSKIGVKVSLRGQDVPTWLKRVYTDRDF
AFVTNGMGNTFDPTIGVQRLYWSKNFKKGVPFSNGSGYSNPEIDAIFEQAAVENDHAKRV
ELFNRMQVIIARDLPDITLVSFRQLTIFNRKVQDHTVVADGLSGSLSSTYILKNA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggacattcgccgacgtcagcttaaccagattctcgctttgagcgcgctcagtgccatc
ctgcccttcagggattttgcgcaagccgcagaacccgttgcgggcggaacgctcaacctt
ctcgtccagcccgagccaccgacgctcgtcacgcttgcccatacggccggcccgacgacc
cgcgtcagcggcaaggtcaccgaaggcctgctcgcctatggcctcgatttcatgccgatc
ccgcagctcgccaccgaatgggatctcagcgatgacgggttggaatatagtttcaagctg
cgagagggtgtgaagtggcatgacgggaaagattttacgtcagaggacgtggccttttcg
atcctggcgctcaaggaggtccatccacgcggtcgtgccaccttctccagtgtgaaggag
gtcgcgacccccgatccgcatacggcgatcatccggctttcgaagcccgccccatacctg
atcggcgccttgcaggcgagcgagtcgccgatcgtgcccaaacatgtctacgacggcacg
aaagacttcgccgcccattcgaacggccgcgcgccgatcggaaccgggccgttcatcttc
cgggaatgggccgtcggcagtcatatcattctcgatcgcaatcctgattactgggacaaa
gggaagccctatctcgatcgtatcgtcatcaagttcattcccgatgcgagcgccaggctc
gcagcactggagaccggtgaggtcgacatcgcacccgacacccccgtctccctcagcgaa
atcgatcgtctgaaggcgtcggcgacgcttgccgtcgacgaccgcggcaacgactattcg
ccaaccgtctaccgcatcgagttcaatctcgccaacgactacttcaaacatgacaaggtc
cgccaggcggtcgcccacgcgatcgaccggcagaagatcgccgatatcgccttctacggt
tacgcagtgccggccccaagtccgatcagccctttcctcaaggccttctacaatcccaac
gtgccggtctatgcttatgatcccgccaaagcggaagaacttcttgacgaggccggcttt
ccgcgaggggccgacggcatccgtttcgaggtgccgcatgatgtcatgccttacggcgat
acctacacgcggatcggcaactatctgcgcgacgcgctgtcgaaaatcggcgtcaaggtc
agcctgcgcggacaggacgtgccgacatggctgaaacgcgtctatacggatcgcgatttc
gccttcgtcaccaatggcatgggcaacaccttcgatccgacgatcggcgtccagcgcctc
tactggtcgaagaacttcaagaagggcgtgcccttctccaacggctccggctacagcaat
ccggaaatcgatgcgatcttcgaacaggccgcggtcgagaatgatcacgccaaacgcgtc
gagctcttcaaccgcatgcaggtgatcatcgcccgtgacctgccagacattacgctggtc
tccttccggcagctgacgatcttcaacaggaaggtgcaggaccatacggtcgtcgcagac
ggcctctccggcagcctttcctccacctacatcctcaagaacgcctga
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