Rhizobium indigoferae: U5G49_006397
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Entry
U5G49_006397 CDS
T09660
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rif
Rhizobium indigoferae
Pathway
rif02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U5G49_006397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_006397
Transporters [BR:
rif02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
U5G49_006397
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Herpes_UL3
Motif
Other DBs
NCBI-ProteinID:
WRW39327
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All DBs
Position
pRinCIP108029d:1121863..1123482
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AA seq
539 aa
AA seq
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MSINRRRFNQLLLLSTAGTLLPSFGARANDETPQSGGTLNFIVEPEPPTILALAHTAGGT
QKVSPKITEGLLTYDFDLTPKPQLATEWSIADDGLSYTFKLRPNVKWHDGKPFTADDVAY
SIELLKQVHPRGRGTFANVTKVETPDPLTAVIRLSKPAPYLLRALYAAESPIVPKHVYEN
IPIADVPINPNGSAPIGTGPFVFKEWVRGSHIILERNPDYWDAGKPYLDQIAIRFVPDGA
ARAAGFETGEFDIGGDNPIPLSDLERIKALPNIGVDSRGYETKGDLTQLIFNLDNEYLKD
VKVRRAIAHAIDLDVILNTVWYGYGHISPTPISVFLPRYYDPSIKPYAFDLKAAEQLLDE
AGYKRGADGIRFKLRLTHNSYNDGFKRVIEYLKQNLARIGIAGTIDSYDFSTYIQKVYKE
RVFDVTAEYLGNQFDPTLGVQRVYWSKNFKLGLPFSNASHYANPEVDRLLETASVEIDED
KRKQEFNAFQKIIADEVPVINLIALENVTVFNKRVKNHTIGAEGVQANFAEVYIKDGQG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaatcgacgccggttcaaccaattgctgctgctgtcgacggccggcacgcta
ctgccgtccttcggcgccagagcgaatgacgagacgccgcagagcggtggaacactcaat
ttcatcgtcgagccggagccgccgaccatccttgcgctggcgcatacggcaggcggcacc
cagaaggtcagccccaagattaccgaggggcttctgacctatgatttcgacctgacgccg
aagccgcagctggcgaccgagtggtcgatcgccgatgatgggctgagctacaccttcaaa
cttcgcccgaatgtcaaatggcacgatggcaagccttttactgcagacgacgtcgcctat
tccatcgagctcctaaaacaggttcacccgcgaggtcggggaacttttgccaatgtcacg
aaagtcgagacgccagaccctctgacggccgtcatccgcctttccaaaccggcgccctat
ctgttgcgcgcgctctatgcggcagaatcgccgatcgtgccgaaacatgtctacgagaat
atcccgatcgccgatgtgccgatcaatccgaacggcagcgcaccgatcggcaccggcccc
ttcgtcttcaaggagtgggtgcgtggttcgcatatcatcctggagcgcaatcccgattac
tgggatgccggcaagccctatctcgatcagatcgccatccgtttcgtgccggacggcgcg
gcgcgcgcggccggattcgagaccggcgagtttgacatcggcggcgataatccgataccg
ctcagcgatctcgagcggatcaaggcgttgccgaatatcggcgtcgattcccgcggctac
gaaaccaagggtgacctgacccagctgatcttcaatctcgacaacgagtatctgaaggac
gtcaaagtcagacgcgcgattgcccacgccatcgatctcgacgtcatcctgaacactgtc
tggtatggctacggccatatttctccgacgccgatcagcgtcttcctgccgcgctattac
gatccatcgatcaaaccctacgccttcgacctcaaggctgccgaacaactgctcgatgag
gccggctacaagcgcggcgccgacggcatccgcttcaagctgcggctgacccacaattcc
tacaatgacggtttcaagcgcgtcatcgaatatctgaagcagaacctggcgcgcatcggc
attgccggaacgatcgattcctatgatttctcgacctatatccagaaggtctataaggag
cgcgtcttcgacgtgaccgccgagtacctgggcaaccagttcgatccgacgctcggcgtg
cagcgtgtctactggtcaaagaatttcaaactcggcctgcctttctccaatgccagccac
tacgccaatcccgaggtcgatcgccttctggaaacggcatcggtcgaaatcgacgaggac
aagcgcaagcaggaattcaatgcgttccagaagatcatcgctgacgaggttccggtcatc
aatctcatcgcgctcgagaacgtcactgtcttcaacaaacgcgtgaagaaccacacgatc
ggcgccgagggcgtgcaggcgaatttcgccgaggtctatatcaaggacgggcaaggctga
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