Rhizobium indigoferae: U5G49_006495
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Entry
U5G49_006495 CDS
T09660
Name
(GenBank) exonuclease domain-containing protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
rif
Rhizobium indigoferae
Pathway
rif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
U5G49_006495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rif03400
]
U5G49_006495
DNA repair and recombination proteins [BR:
rif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
U5G49_006495
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WRW39419
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Position
pRinCIP108029d:1231014..1231763
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AA seq
249 aa
AA seq
DB search
MRSSRIRVIDLETAGNGPNDVCEIGWQDVVLGLDERWRLGDERGALLINPGRPISPETMA
IHHIMDVQVASAPYWKDVALSVLRPDEGVAALAAHRAAFEQRYCTPRLSGGTPWICTWKC
ALRVWPHLPRFSNQMLRYQRMPEGLEHEIGLPAHRAMPDAYVTAHHLRDLLNEASLEQLL
AWSSEPGLLPRVPSGPDRGKGWDRLSLDTLHEFSRDRDVDIRFSAQTELARRGEGQQPVP
PESAQRTLL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagttcccgcattcgcgtcatcgatctcgaaaccgcaggcaacgggccgaacgac
gtatgtgaaatcggctggcaggacgtcgtccttggactggatgagcggtggcgcctgggt
gatgaacgaggcgcgttgctgatcaatcccggccgtccgatctcgcctgagacgatggca
atccaccacatcatggacgtccaggtcgcatcggcaccctattggaaggatgttgcgtta
agcgttcttcgtcctgacgaaggcgtggctgccttggctgcgcatcgagcggcctttgaa
cagcggtactgcactccccggctttcgggcggcacaccatggatctgtacctggaaatgc
gccctgcgcgtatggccccatcttccacggttttccaatcaaatgcttcgctatcaacgc
atgccggaaggactggaacacgaaatcggattgccggcccatcgagccatgccggatgcc
tatgtcacagctcatcacctacgcgacctcctgaacgaggcttcgctcgagcaacttctg
gcgtggagcagtgaaccgggtctcttgccgcgggtgccatctggaccggaccggggcaaa
ggctgggatcgcctcagcctggacacgttgcatgaattttcacgagaccgggacgtcgat
attcgtttcagcgctcagaccgaattggcccgccgcggcgaaggtcaacaacccgttcca
ccagagtcagcgcagcgaacgctgctctag
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