Rhizobium indigoferae: U5G49_006538
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Entry
U5G49_006538 CDS
T09660
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rif03000
]
U5G49_006538
Transcription factors [BR:
rif03000
]
Prokaryotic type
Helix-turn-helix
LacI family
U5G49_006538
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_Tnp_ISL3
HTH_23
Sigma70_r4
HTH_Crp_2
HTH_31
HTH_AraC
TetR_N
GntR
AARP2CN
B12-binding
HTH_17
Motif
Other DBs
NCBI-ProteinID:
WRW37796
UniProt:
A0ABZ1DNJ9
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All DBs
Position
pRinCIP108029c:complement(27510..28586)
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AA seq
358 aa
AA seq
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MKNEDEPKDKRLKPGEAQKLTMAEVAKYVGVSAMTVSRAFRQDASVSEETRKRIMEAVDA
LGYVLDLSAGSLSSRRSGFIAALVPSINNSNFSDTARGITDALQNTGLQLLLGYTDYSAE
KEEELIEAMLRRRPEGIILTGGSHTARARRMLAKAGIPVVETWELPENPINQVVGFSNSE
AMALLVRTLAGQGYRKFGYIGGTTARDTRGSQRRSGFQKTVEELGLGPGRMISFGVPPIT
MEQGGQAIVSLLERWPDTEVVLCVSDLSAFGAIMECTRRGMKVPRDIAIAGFGDYEISSI
CHPRITTINVDCYGIGRQAAARLLDTLHTGEATGDEITLTGYKVVLRESTERNGASIA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacgaggatgagccgaaagacaagcgtctcaagccgggagaggctcaaaagctg
acgatggcggaagtcgccaaatatgtcggcgtctccgccatgaccgtttcgcgcgccttt
cgccaggatgcgagcgtttccgaggagacccgcaagcgtatcatggaagccgtcgatgcg
ctcggctatgtgctcgacctgtcggccggcagtctttcgtcgcggcggagcggcttcatc
gccgccctggtgccctcgatcaacaattcgaatttttccgacaccgcgcggggcattacc
gatgcgctgcagaataccggccttcaactccttctcggctataccgactattcggcggag
aaagaggaagagctgatcgaggcgatgctgcgccgccgccctgaaggcatcatcctgacg
ggtggttcgcacacggcacgcgcgcggcgcatgcttgcaaaagccggcattcccgttgtc
gagacctgggaacttccggaaaatccgatcaatcaggtcgtcggcttttccaacagcgag
gcgatggccttgctggtgcggacgctcgccggccagggatatcggaagttcggctatatc
ggcggaacgacggcgcgcgatacgcgcggcagccagcggcgaagcggtttccaaaagact
gtcgaagaactcggcctcggaccgggacggatgatttccttcggcgtcccgcccatcacg
atggaacaaggcggccaggcgatcgtcagtctgctggagcgctggccggacacggaggtg
gttctctgcgtctccgacctttccgcctttggcgccatcatggaatgcacgcgccgggga
atgaaggttccaagggacatcgccattgccggtttcggcgactacgagatctcgtccatc
tgccatccgcgcatcaccaccatcaatgtcgattgttatggcatcggtcgccaggcggct
gcccgcctgctggataccctccataccggcgaggcgaccggcgatgagatcacattgacc
ggctacaaggttgtcttgcgcgaaagcacggagcggaatggcgcgtcgatcgcttga
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