Rhizobium indigoferae: U5G49_006547
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Entry
U5G49_006547 CDS
T09660
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rif
Rhizobium indigoferae
Pathway
rif02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U5G49_006547
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_006547
Transporters [BR:
rif02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
U5G49_006547
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WRW37805
LinkDB
All DBs
Position
pRinCIP108029c:complement(39170..40759)
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AA seq
529 aa
AA seq
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MNDYTKYLASRVTAGGLSRREFMGRAMAAGITLAVADKLFTESAEAAEPKRGGHLKLGLE
GGAATDSKDPAKFLSQVMFCIGRCWGDMLVESDPLTGAAVPSLAESWEPSKDAVTWTFKI
RKGVKFHDGKELTIDDVVATLKRHTDAKSESGALGVLGSIKEIKADGGNLVLTLSEGNAD
MPLLLSDYHLVIQPNGGVDDPLASIGTGPYKMTSFEPGVRATFERNKDDWRSDRGYVDSI
EIIGMNDATARIAALSSGQVHYINRVDPKTVNLLKRAPNVEILSTAGRGHYVFIMHCDKA
PFDNNDLRLALKYAMDRETMVQKILGGYGKVGNDFPINSTYALFPEGIEQRAYDPDKAAF
HYKKSGHSGSVLLRTSEVAFPGAVDAAVLYQESCKKAGIEIEVKREPGDGYWTNVWNVQP
FSTSYWGGRPTQDQMYSTAYLSTADWNDTKFKRPDFDKLLLQARSELDEAKRKDMYRTMA
MTVRDEGGVILPMFNDFVNASTKQVKGYVHDIGNDMSNGYVATRVWLDA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaacgactacacgaaatatctcgcaagccgtgtcaccgccggtgggctcagccgccgc
gaattcatgggacgcgccatggcggcgggcatcacacttgccgtcgccgacaagctcttc
accgaaagcgccgaagccgccgaaccgaaacgcggtggccacttgaagctcggcctcgaa
ggaggtgcggccaccgattcgaaggatccggcaaagttcctatcgcaggtcatgttctgc
atcggccgctgctggggtgacatgctggtcgagtccgatccactgacgggtgctgccgtg
ccctcgcttgccgaatcctgggagccgtcgaaggacgctgtcacctggaccttcaagatc
cgcaagggcgtcaagttccacgatggcaaggagctgacgatcgacgacgttgtagcgacg
ctgaagcgccacacggacgcgaagtcggaatccggcgcgctcggtgttctcggctcgatc
aaggagatcaaggccgacggcggcaatctcgtgctgaccctcagcgaaggcaatgccgac
atgccgctgctgctgtccgactaccatctggtcattcagccgaacggcggcgtcgatgat
ccgctggcctcgatcggcaccggcccttacaagatgacgagcttcgagcccggcgtccgc
gccaccttcgaaaggaataaggacgactggcgctccgaccgaggttatgtcgattcgatc
gagatcatcggcatgaacgacgccaccgcccgcatcgcggcattgtcgtccggtcaggtg
cactacatcaaccgcgtcgacccgaagaccgtcaacctgctgaagcgcgcgccgaatgtc
gagatcctctcgactgccggccgcgggcactacgtcttcatcatgcattgcgacaaggcg
ccgttcgacaacaacgacctgcgcctggccctcaaatacgccatggaccgcgagaccatg
gtgcagaagatcctcggcggttacggcaaggtcggcaacgacttcccgatcaacagcacc
tatgcgctgttccccgaaggcatcgagcagcgcgcctacgatcctgacaaggcggcgttc
cactacaagaagtcgggccatagcggctcggtccttctgcgcacctccgaagtcgccttc
cccggcgccgtcgacgcggccgttctctatcaggaaagctgcaaaaaggccggcatcgaa
atcgaggtcaagcgcgagccgggcgacggctactggaccaacgtctggaacgtccagccc
ttctcgacctcttattggggtggccgtccgacgcaggatcagatgtattccaccgcctat
ctctcgacggcggactggaacgacaccaagttcaagcgtcctgacttcgacaagctgctg
ctgcaggcccgctccgaacttgatgaagccaagcgcaaggacatgtatcgcaccatggcg
atgacggtgcgcgacgagggcggggtgatcctgccgatgttcaacgacttcgtgaacgcc
tccaccaagcaggtgaagggctatgtccacgacatcggcaacgacatgtcgaacggctac
gtcgcgacccgcgtctggctggacgcctga
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