Rhizobium indigoferae: U5G49_007108
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Entry
U5G49_007108 CDS
T09660
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rif
Rhizobium indigoferae
Pathway
rif02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U5G49_007108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_007108
Transporters [BR:
rif02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
U5G49_007108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_21
nSTAND_NTPase5
nSTAND3
AAA_25
AAA_30
AAA_29
AAA_16
AAA_22
Rad17
Motif
Other DBs
NCBI-ProteinID:
WRW37530
UniProt:
A0ABZ1DRE2
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All DBs
Position
pRinCIP108029a:57844..58938
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AA seq
364 aa
AA seq
DB search
MALKMKSYLPTEDELLEKAPVPAQIEFCNVTKLYGAVAAVKDISLSVSRGEFLTILGPSG
SGKTTALMLLAGFTTPSEGDILIAGKSVSEVPSYRRDQGIVFQSYALFPHLTVARNLEFP
LEMRGVNSAERAKRVSRMLERVRLSEFGGRMPSQLSGGQQQRVALARALIADPPILLLDE
PLGALDRNLREQMQIEIKDLHREFGKTTICVTHDQEEALTLSDRIVVMRSGQIEQIDTPE
ALYDRPNTRFVANFLGEANVLEGADLKVQSDVVPSPGMVAMLRPERICVNAPTGPRRSDA
EHRQSVAGVIEDMIYAGPLRKYRVRVGDTVLIAREHVASGQEVFGAGDEVRLDWLRSDVR
FVTA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaaatgaaaagttaccttcctaccgaggacgaattgttggagaaagcccca
gttcccgcccagattgagttctgcaacgtcactaagttatatggggcggttgcggcggtc
aaagatatctcgctctcggtgtctcgtggcgagttcttgaccatactggggccgagtggg
tcggggaaaaccacagcgttgatgctgcttgctgggttcaccactccgagcgaaggagat
atcctgatcgccgggaaatcagtctcggaagttccgtcttatcgacgcgatcagggaatt
gtattccaaagttacgcacttttcccgcacttgaccgtcgcccgcaacctcgaatttcca
cttgaaatgcgtggtgtcaatagcgcggaaagggcgaagcgggttagccggatgcttgag
cgcgtccgcctcagtgaattcggtggtcgcatgccgtcccaattgagcgggggtcagcaa
cagcgcgtagcccttgcgcgcgccttgatcgcggatccgcctatcctgctgctcgatgaa
ccgcttggcgcacttgaccgaaatctgcgcgagcagatgcagattgaaatcaaggatctt
caccgggaatttgggaagacgactatctgtgtgacccacgaccaagaagaagcgctcacc
ttgtctgatcgcatcgtggtgatgagatctgggcagatagagcaaatcgacacgcccgaa
gccttatacgaccgtccgaacacgcgctttgtcgcaaacttcctgggcgaggccaacgtt
ttggaaggcgcagacttaaaggttcaatccgatgtcgtgccttcgcccggaatggtcgca
atgctccgacccgagcgcatttgcgtcaacgcgccgactgggccgaggcgcagcgatgcg
gagcacaggcaatctgttgccggcgtcatagaagatatgatctatgccggtcccttgaga
aaatacagggtacgtgttggcgacacagttctgatcgctcgagagcacgtcgcctccggg
caagaggtgttcggcgcaggcgacgaggttcgcctcgactggcttcgatcagacgttcgg
tttgtaaccgcctaa
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