Rhizobium indigoferae: U5G49_007220
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Entry
U5G49_007220 CDS
T09660
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rif03000
]
U5G49_007220
Transcription factors [BR:
rif03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
U5G49_007220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
HTH_20
HTH_24
LexA_DNA_bind
Sigma70_r4_2
NirdL-like_HTH
MarR
HTH_11
MarR_2
Sigma70_r4
DUF1045
HTH_8
HTH_5
HTH_40
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
WRW37619
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All DBs
Position
pRinCIP108029a:166921..167643
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AA seq
240 aa
AA seq
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MDVARSKVSDAGTPVACASCQARHGVVCGALWSDQLRELGRQSLRRTVDAGSEIIAQGSE
SSVYSNIMRGVVKLCKVMPDGRQQIVGLQFAPDFVGRPFVPENMLSAQAATDAEICVFPR
DLLDRMISETPKLQRSLHDQALKELDAAREWMLTLGRRTAEEKVASLLHLIATHAEPQTA
TTTSFDLPLSRAEIADFLGLTIETVSRKLTKLRKSGVIRIENFRHIIVPDMDELERMISA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgcacgcagtaaggtttccgacgccggcactcccgtcgcttgcgcttcctgc
caagcgcggcacggcgtcgtctgcggcgcgctgtggagcgaccaactccgagagctcggc
cgccagtcgctgcgccgcacggtcgatgccggcagcgagatcatcgctcaagggtcggaa
agctctgtctattcgaacatcatgcgcggggtagtaaagctctgcaaggtgatgccggac
gggcgccagcagatcgtcggcctgcaattcgcccccgatttcgtcggcaggcccttcgtg
cccgaaaacatgctgtcggctcaggctgcgaccgacgccgaaatctgcgtcttcccccgc
gacctgctcgaccgcatgatatcggagacgccgaagctgcagcgcagcctgcacgatcag
gcgctgaaggagctggacgccgcgcgcgaatggatgctgacgctcggccggcgcaccgcc
gaggagaaggtcgcaagcctgctccacctcatcgccacccacgccgaaccgcagaccgcc
acgaccacctctttcgacctgccgctgtcccgcgccgagatcgccgattttctcggtctg
accattgaaaccgtcagccgcaagttgaccaagctgcgcaagagcggtgtcattcgcatc
gagaactttcgacatatcatcgtccccgacatggatgaactggagcggatgatcagcgca
tag
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integrated database retrieval system
