Candidatus Riesia sp. GBBU: AOQ88_00195
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Entry
AOQ88_00195 CDS
T04782
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rig
Candidatus Riesia sp. GBBU
Pathway
rig03030
DNA replication
rig03430
Mismatch repair
rig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOQ88_00195
03430 Mismatch repair
AOQ88_00195
03440 Homologous recombination
AOQ88_00195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rig03032
]
AOQ88_00195
03400 DNA repair and recombination proteins [BR:
rig03400
]
AOQ88_00195
Enzymes [BR:
rig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOQ88_00195
DNA replication proteins [BR:
rig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOQ88_00195
DNA repair and recombination proteins [BR:
rig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOQ88_00195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
HNH_3
Motif
Other DBs
NCBI-ProteinID:
ARC54692
LinkDB
All DBs
Position
37958..38992
Genome browser
AA seq
344 aa
AA seq
DB search
MILIYPEDIKKIFFKKKFNFYLLIGKDFFFLKESLKKITKLARIFEFNETYKFDLDQNIN
WNKVYNLIQSFHLFSKKQIILLDFFRKNITSKNLNNLIHFQNLYNDNILLIIRSNRQNFI
KQNSILFLKIKKNIIYVDCNFPNKNRAFSLIKQEFKRINISLDKKIFNVLYYNFEGNFSE
FNQSIKFLKELHKDRIKYNNKIENLLQRSVKFNYYQWINSIFSGDIEKSLCILENIEFKK
ETIQKVLKIVQRYLILISLLKYCSSKRLNILLKRTVICNLKTRLVEDAKLYLKESDIHLA
ITIIIRIKKNIETKSKDILKRELEKLSLVICGKYKNSLKKFFYD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgattcttatttacccagaagatattaagaaaattttttttaaaaaaaagtttaatttt
tatttacttataggaaaagattttttctttttaaaagaaagcttaaaaaaaataacaaaa
cttgctagaatatttgaatttaatgaaacatataaatttgatttagatcaaaatataaac
tggaataaagtttataatttaatacaatcatttcatttatttagtaagaagcaaattata
cttttagatttttttagaaaaaatattacttcaaaaaatttaaataatctcatacatttt
cagaatttatacaacgataatatattattaatcataagaagtaacagacaaaattttata
aaacaaaatagtatattgtttttgaaaattaaaaagaacataatttacgtagactgtaat
tttccaaataaaaacagagcgtttagtttgataaaacaggaatttaaaagaataaatatt
tcattagataaaaaaatatttaatgtattatattacaattttgaaggaaatttctcagag
tttaaccaatcaattaaatttttaaaagaactacataaagatagaataaaatataataac
aagatagagaatctcttacaaagatcagttaaatttaattattatcaatggataaactct
atcttttctggtgatatagaaaaaagtttgtgtatactagaaaacattgagtttaaaaaa
gaaactatacagaaagttttaaaaattgttcaaagatatttaatactaatatcattacta
aaatactgttccagtaaaagattaaatatcctcttgaaaagaacagtaatatgtaactta
aaaacaagattggttgaagatgctaaattatatttaaaagaatctgatatacatttagct
ataacgattattataagaattaaaaagaatattgaaacgaaatctaaagacattcttaaa
agagagttagaaaaattgtctttagtgatatgtggtaaatataaaaactcactgaaaaaa
tttttttatgattaa
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