Candidatus Riesia sp. GBBU: AOQ88_00435
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Entry
AOQ88_00435 CDS
T04782
Name
(GenBank) hypothetical protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
rig
Candidatus Riesia sp. GBBU
Pathway
rig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AOQ88_00435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rig03400
]
AOQ88_00435
Enzymes [BR:
rig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOQ88_00435
DNA repair and recombination proteins [BR:
rig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AOQ88_00435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
ResIII
tRNA_anti-codon
RecG_dom3_C
Cas3-like_C_2
AAA_30
SecA_DEAD
PhoH
nSTAND_NTPase5
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
ARC54735
LinkDB
All DBs
Position
complement(95674..97746)
Genome browser
AA seq
690 aa
AA seq
DB search
MKEIHKIPISFLKKVDRKKEKYFKKIGIYTIQDLLFYFPIFYKKRGKLISIKEVQKNIEV
ILYGKILDNNIISGKRKIMVVQIGDSSGTINIKFFNFSDFTKKKLSVGKHILVCGKAIKE
RENYTIIHPRYRIREKKKKYLLNRHIPVYQRINGISQIYLRKIILQALKLLDNYDLREVI
PKTIQKYKITLKESIKIVHSPNIKYSIRLLNKFSHPAQKRLIFEELLTYQLFIRVSKDNI
KKLLSPKLKLKYELKNQVLSSLPYNLTKSQEKAIKEVEFDLTRKYPMMRLIQGDVGSGKT
IVALFSAIQVISNKKQVAFMAPTEILAKQHFDNFRKWLNPFSITIGWIHGKQRESIKKIQ
IKNILSGKTLVVVGTHAIFQKKIKFRSLGLIIIDEQHRFGVFQRLMLLEKGKRKKLFPNQ
LIMTATPIPRTLAMTIYANLDISTLVEKPLGRIPVKTIVLPETKRKKLVLRIGEILQKSN
KQAYWICNIINISKQINIKSITSTKKSLLMMLPKIKIGIIHGKMNFEDKRKIMENFRRKE
IQLLISTTTIELGIDIPNANFIIIENSERFGLTQLHQLRGRIGRGNKGSFCIFLYKKPLS
YKGKLKLEILKKWNNGFLISNKDLEIRGYGKIFGTQQTGKKLFKIADLYRDKHIMYNIKN
VLETTQKCCQKRAHLLFKRWINEGHKFILV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatacataaaataccaataagttttttaaaaaaagttgacagaaaaaaagaa
aaatattttaaaaaaattggtatttatactatacaagatctgttattttattttccgatt
ttttacaaaaaaagaggtaaacttatttcaatcaaagaagttcaaaaaaatatagaagta
attctatatggaaaaatattggataacaatattatttcaggaaaaagaaaaattatggtt
gttcaaataggagacagttctggaacaataaatataaaattttttaacttctctgatttt
acaaaaaaaaaactttctgtaggaaaacatatacttgtatgtggaaaagctataaaggaa
agagaaaattacacaattattcatcctagatataggattcgcgaaaaaaaaaagaaatat
ttactcaacagacatattccagtttatcaaagaattaatggaattagtcaaatatactta
agaaaaataatattacaagcattgaagttattagataattatgacttacgagaagttatt
ccaaaaactatacaaaaatataaaattacattaaaggagtctattaaaatagttcattct
ccaaatattaagtattctataagacttttaaataaattttctcatccagctcaaaaaaga
ttaattttcgaagaattattaacatatcaactttttattagagtaagtaaagataatatt
aagaaattattatcccctaaattaaagttaaaatatgaactaaagaatcaagttttatct
tctcttccatataatctaacaaaatctcaggaaaaagcaataaaagaagtagagtttgat
cttactcgaaaatatcctatgatgagattaatacaaggggatgtaggatcaggaaaaact
atagttgctttattttcagcgatacaagtaatttctaataaaaagcaagttgcgtttatg
gctccaacagaaatattagctaaacaacattttgacaattttagaaaatggttaaatcct
ttcagtataacaatcggatggatccatggaaaacaaagagaatcaattaaaaaaatacaa
ataaaaaatatactaagtgggaaaactcttgtagttgttggaacacatgcaatttttcaa
aaaaaaataaaattccgttctcttggattaataattatagacgaacaacatagatttgga
gtgtttcaaagattaatgttattagaaaaaggaaaaagaaaaaaattgtttccaaatcaa
cttattatgacagctactccaattcctagaacattggcaatgaccatatatgcaaattta
gatatttcaactcttgtagagaaaccacttggtagaattcctgtaaaaactatagtttta
ccagaaacaaaaagaaaaaagttagttttacgaataggcgaaatacttcaaaaaagtaat
aaacaagcttattggatttgtaatattataaatatttctaaacaaattaatataaaatct
atcacttcaactaaaaaatcattattaatgatgttgccaaaaataaaaattggtattatt
catggaaaaatgaattttgaagataagagaaaaataatggaaaattttaggagaaaagaa
atacaattattaatatctacaacaacaattgaactaggaatagatattccaaatgctaac
ttcataataattgaaaattcagaaagatttggacttactcagcttcatcaattaagggga
cggataggcagaggaaataaaggttctttttgcatttttttatacaaaaaaccattaagt
tacaaaggaaaactaaaactagaaattttaaaaaaatggaacaatggatttttaatctca
aataaggatctagaaattagaggatatggaaaaatttttggtactcaacagacaggcaaa
aaattatttaaaatagcggatctatatcgtgataagcatattatgtataacataaaaaat
gttttagaaactacacagaaatgttgtcaaaaacgagcccatcttttatttaaaagatgg
attaatgaaggacataaatttatcttagtgtaa
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