Candidatus Riesia sp. GBBU: AOQ88_00445
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Entry
AOQ88_00445 CDS
T04782
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rig
Candidatus Riesia sp. GBBU
Brite
KEGG Orthology (KO) [BR:
rig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rig03032
]
AOQ88_00445 (gyrB)
03400 DNA repair and recombination proteins [BR:
rig03400
]
AOQ88_00445 (gyrB)
Enzymes [BR:
rig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AOQ88_00445 (gyrB)
DNA replication proteins [BR:
rig03032
]
Prokaryotic type
DNA Topoisomerases
AOQ88_00445 (gyrB)
DNA repair and recombination proteins [BR:
rig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AOQ88_00445 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
GyrB_insert
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
MCEL_GT_NTPase
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ARC54736
LinkDB
All DBs
Position
complement(99207..101621)
Genome browser
AA seq
804 aa
AA seq
DB search
MKNNYNSSSIKVLKGLEAVQKRPGMYIGSTDDGSGLHQMVFEIVENSIDEALAGYCNKII
VTIHKDNSISVLDNGRGIPTEIHEEGISAAEVIMTFLHSGGKFDNNTYLMSSGLHGVGIS
VVNALSEMLELIIYRNGKIHKQIYKFGVPKTNLYVIGDTDKVGTYIRIWPNLEIFKNFTR
FEYNILSKRFKELSFLNSNISIILNDQFNKKQENFHSSGGIKSFLKYIINDNEIINLNSF
YFSENLNDIYVELSMQWTNNNQSKIYCFTNNVAQKDGGTHLSGLKTAITRTFRSYMEKAK
YLLKNKIFIKSEDIREGIIAILSIRMLDPRFSSQTKDKLVSMKVKNVVESLVNEKLMDFL
EENPLDAKILINKIINSAKSREEAKKIKQITKQKNETNIIGFSGKLADCQEKNPCFSELY
LVEGDSAGGSAKQGRDRKNQAVLPLKGKILNIEKASFEKIISSKEITSLITVLGFEIGKD
EYNFNKLRYHNIIIMTDADIDGSHIRTLLLTFFYRKIPEIIHKGYIYIANPPLYKIKKGK
IEKYINDDNEMRKYLFSTAIKEASLYIKESNFSVLDGRNLYDLLIKYSKIKRISKRLRYY
FPENLIKCLIYQSLLTKETLKKYEKTEKWISTFTNFLSLKEGHCGNYKYYIDINKKNGVF
EPILIISKYGVEVSCKFGYDFINSMDYLEISQIIKSIGKTQYDNAYIRKGNKEKKINYFE
EAFEWLLKESSKGLNIQRYKGLGEMNPEQLWETTMNPSTRKIKKITVKDASSADKLFKIL
MGESVELRRRFIEKNALLVENIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataattataattcatcaagtataaaagttttaaaggggttagaagcagttcaa
aaacgtcctggaatgtatataggtagtacagatgatggcagtggacttcatcagatggtg
tttgaaatagttgaaaattcaatagatgaagctttagcagggtattgcaataaaattatt
gttactatacataaagataattctatttctgttttggacaatggcagaggtatccctact
gaaatacatgaagaaggaatatccgctgctgaggttattatgacgtttttacattctggt
ggaaagtttgataataacacttatctaatgtcaagtggattacatggagttggaatatct
gtagttaatgctttatcagaaatgttagagttaataatttatagaaatggaaagattcat
aaacaaatttataaatttggagtaccaaaaacaaatctttacgttattggagatacagat
aaagtaggaacttacattcgtatttggcccaatttggagatttttaaaaattttacaaga
tttgagtacaacattttatcaaaaagatttaaagaactatcttttctaaattctaacata
tctattattttgaacgaccagtttaacaaaaaacaagaaaattttcactcgtcgggtggt
ataaaatcatttttgaaatatattataaatgataatgagataataaatttaaatagcttt
tatttttcagaaaatctaaatgatatatacgtcgaattatctatgcaatggacaaataat
aaccaaagtaagatttattgttttaccaacaatgtagcccaaaaagatggcggaactcat
ctttctggactaaaaactgcaataactagaacttttcgttcttatatggaaaaagctaaa
tatcttttgaaaaataaaatttttattaaaagtgaggatattagagaaggaattatagca
attctttcaataagaatgctagatccaagattttcttcacaaacaaaagataaattagtt
tcaatgaaagtgaaaaatgtagttgaatcattggttaatgaaaaattaatggatttctta
gaagaaaatccattagatgcaaaaatcttaattaataagataatcaattctgcaaaatct
agagaagaagctaaaaaaattaaacagataactaaacaaaaaaatgaaacaaacataatt
ggattttccggaaaattagcagattgtcaagaaaaaaatccatgtttttcagaactttat
ttagttgaaggagattcagctggaggatctgcaaagcaaggtcgtgatagaaaaaatcaa
gctgttcttcctttaaaggggaaaattcttaatatagaaaaagcaagctttgaaaagata
atatcttcaaaagaaattacatctttgattactgtattaggatttgaaataggaaaagac
gaatataattttaacaaactaagataccataatattattattatgactgatgctgacatt
gatggatctcacataagaactttgttattaacttttttctatagaaaaataccagaaatt
atacataaaggttatatttatatagcaaatccaccattatacaaaattaaaaagggtaaa
atagaaaagtatattaacgatgataacgaaatgagaaaatatttattttctacagcaata
aaagaggcttctttgtatattaaggaaagtaatttttctgttctagatggtagaaacctt
tatgatttgttaattaagtatagtaagataaaaagaattagtaaaagattgagatactat
tttccagaaaatttaataaaatgtttgatatatcaatctctactaactaaagaaactttg
aaaaaatatgaaaaaacagaaaagtggatttcaacgtttactaattttctttctttaaaa
gaaggtcattgtggaaattacaaatattacattgatataaataaaaaaaatggagttttt
gaaccaatattaattattagcaaatatggtgtagaagtatcttgtaagtttggatacgat
tttattaatagtatggattatttagaaatttctcaaattattaaatcaattggaaaaact
caatacgataatgcttacattagaaaagggaataaagaaaaaaaaattaattactttgaa
gaagcttttgaatggcttttaaaagaatcttctaaagggttaaatatacaaagatataaa
gggttaggagaaatgaatccagaacaattatgggaaacaactatgaatccttcaactaga
aagataaaaaaaattacagtaaaggatgctagttctgcagataaattatttaagatatta
atgggagaatcagtagaacttagaagaagattcatagaaaaaaatgctttactagttgaa
aatatagatatataa
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