Candidatus Riesia sp. GBBU: AOQ88_01080
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Entry
AOQ88_01080 CDS
T04782
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rig
Candidatus Riesia sp. GBBU
Pathway
rig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOQ88_01080 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rig03019
]
AOQ88_01080 (groEL)
03110 Chaperones and folding catalysts [BR:
rig03110
]
AOQ88_01080 (groEL)
03029 Mitochondrial biogenesis [BR:
rig03029
]
AOQ88_01080 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rig04147
]
AOQ88_01080 (groEL)
Enzymes [BR:
rig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AOQ88_01080 (groEL)
Messenger RNA biogenesis [BR:
rig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AOQ88_01080 (groEL)
Chaperones and folding catalysts [BR:
rig03110
]
Heat shock proteins
HSP60 / Chaperonin
AOQ88_01080 (groEL)
Mitochondrial biogenesis [BR:
rig03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AOQ88_01080 (groEL)
Exosome [BR:
rig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AOQ88_01080 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AOQ88_01080 (groEL)
Exosomal proteins of breast cancer cells
AOQ88_01080 (groEL)
Exosomal proteins of colorectal cancer cells
AOQ88_01080 (groEL)
Exosomal proteins of bladder cancer cells
AOQ88_01080 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ARC54841
UniProt:
A0A1V0HQ32
LinkDB
All DBs
Position
229902..231542
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGSEARSKMLRGVNILADAVKVTLGPKGRNVILDKSFGAPSITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVSEGLKAVAAGMNPMDLKRGI
DKAVSAAVEELRNLSNTCDDNKSIEQVGTISANSDQSVGKLIADAMEKVGKEGVITVEEG
SGLEDQLDVVEGMQFDRGYLSPYFINKPDSGSSELENPYILLVDKKISNIRELLPILESV
AKASKPLLIIAEDVEGEALATLVVNNLRGIVKVSAVKAPGFGDRRKAMLQDIAILTNSSV
ISEEVGMDLEKTTLDNLGQAKRVVINKDTTTIIDGVGKKSSIRNRVKQIMQQRDEATSDY
DREKLQERIAKLSGGVAVIKVGAATEVEMKEKRARVDDALHATRAAVEEGVVAGGGISLV
RVARRLDQLKGENEDQTVGIRIALKAMESPMRQIVENAGEEPAVVVNNVKNGKDNYGYNA
STEKYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITDLPKEEKSDLGNPSGMGG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggtagtgaagcacgatctaagatgcttcgtggagtt
aatattcttgcagatgcagttaaagttacactgggtccgaagggtagaaatgttatttta
gataaatcttttggagctccttcaataactaaagatggtgtttccgttgcaagggaaata
gaattagaagataagtttgaaaatatgggggcacagatggttaaggaagtagcttccaaa
gcaaatgatgcagcaggggatggaaccactacagcaacagttctagctcaatctattgtt
agtgaaggactgaaagcggttgctgctggtatgaatccaatggatttaaagagaggaata
gacaaagcggtatctgcagcagtagaagagcttagaaatctttctaatacttgtgatgat
aataaatctatagagcaagttggaactatttcagctaattcagatcaatctgttggaaaa
ttaatcgctgatgctatggaaaaagtcggcaaagaaggagttattacagtagaagaagga
tctggcttggaggatcaattagatgttgttgaaggaatgcagtttgacagaggttatttg
tctccttatttcatcaacaaacctgattcaggatcttctgaattagaaaatccatatatt
ctgttagttgataaaaaaatttctaatattcgtgagcttttacctattcttgaaagtgtc
gctaaagcaagtaagcctcttttaatcattgctgaagacgtagaaggagaagcattagct
acacttgttgtaaataatttaagaggaattgtaaaagtttctgctgttaaagctccagga
tttggagatcgaagaaaagccatgcttcaagatatagctatacttactaatagttcagtt
atttctgaagaagttggaatggatctagaaaaaacaacattagataatttaggacaagct
aaacgagttgtaattaataaggatactactactataatagatggggttgggaaaaaatca
tctattagaaatagagtgaaacaaattatgcaacaaagagatgaagctacatctgactat
gacagagagaaacttcaagaaagaattgcaaaattatctggtggtgtggctgtaataaaa
gttggggcggctacagaggttgaaatgaaagaaaaacgtgctcgtgtcgatgatgcttta
catgctactcgagctgcagtagaagaaggagttgtagctggaggtggaatatcacttgtt
agagttgctagaagacttgatcaattaaaaggagagaatgaggatcaaactgttggaatt
agaatagctttaaaagctatggaatctcctatgagacaaatagttgaaaatgcaggagaa
gaaccagctgttgttgtaaataatgttaagaatggaaaagacaactatggttataatgct
tcaactgaaaaatatggagatatgatagaaatggggattttagatccaactaaagttact
agatcggctttacaatttgccgcttctgtagctggtcttatgattacaactgaagctatg
ataactgatctaccaaaagaagaaaaatcagatttaggtaatccttccggaatgggagga
ggaatgggaggtatgatgtag
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