Rhizobium indicum: FFM53_000065
Help
Entry
FFM53_000065 CDS
T07009
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
rii
Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rii01002
]
FFM53_000065
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rii01011
]
FFM53_000065
Peptidases and inhibitors [BR:
rii01002
]
Cysteine peptidases
Family C82
FFM53_000065
Peptidoglycan biosynthesis and degradation proteins [BR:
rii01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FFM53_000065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QKK14870
LinkDB
All DBs
Position
11192..13105
Genome browser
AA seq
637 aa
AA seq
DB search
MTFVLKSAASALALSCGVAMMSAAPAHAYTLMDMLRGDRQRTQSTIFMDQMPPGRVGQRG
GAGGSLGGLDPEAPLPKVSGPRYYTYKTETLQFVDTGRFADPVVTGAVADVSGSGDASAE
PAVQRRFLAQAKVRANADVAKALEAYYGDSRNPLVWVEGNQINDRAKSAMLALADASFVG
LDPADYVVQTPDIDPANPDPAFRDRALTQFELDLSAKVLAFVQDTVRGRIDPNKISGYHD
FQRKVVNLAPVLKLARMSPDVGAYIASRSPDSPQFQALKAELAKLRAADGGNEERIVVSL
DRLLRPGDSSPEITNIVKAIGKHGSETLKTDHAATLAAYAGSIDYSPEIVSLVEDFQKER
GLKPDGVIGQATVRAMTGGDTNASKIDKLVVAMEQARWLPEDLGSRYVMINQPAYMVYYH
NDGKEQLSMRVVVGGKNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQ
LGYEVEVNGHAVASSSVDWYGSTNNVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKS
FFKRDMRALSHGCVRLADPRAMAAAVLGTTTDDIAKQIASGQNHAVRVPQKIPVYVSYFT
AWPNKDGVVEYFDDVYGRDAYVDRAFDATSKARGAQI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgttttgaaaagcgcggcatccgcattggcactttcctgcggcgtggcaatg
atgagtgccgcacccgcgcatgcttatacactgatggacatgctgcgcggcgacaggcag
cggacgcagagcaccatcttcatggaccagatgccgcccggtcgtgtgggccagcgcggc
ggcgccggtggctcgctcggcgggctcgatccggaagcgccgctgcccaaggtgagcggt
ccgcgttattatacctacaaaaccgagacgctgcagttcgtcgataccggcaggtttgcc
gatcccgtcgtcaccggcgcggtcgccgatgtttcgggcagcggtgatgccagcgccgag
ccggccgtgcagcgccgtttcctggcgcaggccaaggtgcgcgccaatgccgacgtcgca
aaggcgctcgaagcctattacggcgacagccgcaatccgctcgtctgggtcgagggcaac
cagatcaacgaccgcgccaagtcggcgatgctggcacttgccgatgcgtccttcgtcggt
ctcgacccggcggattacgtcgtccagacgcctgatatcgacccggccaatcccgatccc
gctttccgcgaccgggcgctgacacagttcgagctcgatctctccgccaaagtgctcgcc
ttcgtgcaggacacggtgcgcggccgcatcgatccgaacaagatctccggctatcacgac
ttccagcgcaaggtggtcaatctggccccggtgctgaagcttgcccgcatgagccccgat
gtcggcgcctatatcgccagccgctcgcccgatagtccgcaattccaggcgctgaaggcg
gagcttgccaagcttcgcgccgccgacggcggcaatgaggagcgaatcgtcgtttcgctc
gacaggctgctgaggcctggcgacagctcgccggaaatcaccaatatcgtcaaggcgatt
ggcaagcacggttccgaaacgctgaagaccgatcatgcggcaacgcttgctgcttacgcc
ggtagcatcgactattcgcccgagatcgtttcgctggtcgaggatttccagaaagagcgt
gggctgaagcccgatggcgtcatcggccaggcgacggtgcgtgccatgaccggcggcgat
accaatgcctcgaagatcgacaagctcgtcgtcgccatggagcaggcgcgctggctgccg
gaggatctcggttcccgctatgtcatgatcaaccagccggcctacatggtctactaccac
aatgacggcaaggaacagctgtcgatgcgcgtggtggtcggcggcaagaacaaccagacc
tatttcttcgacgacgaaatcgagacggtcgagttcaaccctttctggggtgtaccccag
tcgatcatcatcaacgagatgctgccgaagctgcgctcggatcccaactatctcgaccag
ctcggttatgaggtcgaagtgaacggccacgccgtcgcctcgtcaagtgtcgactggtac
ggctcgaccaataatgtttcggtgcgccagccgccaagcagcgacaatgcgctcggcgaa
ctgaagatcctgttcccgaacagccacgcgatctacatgcacgacacgccgtcgaagagc
ttcttcaagcgcgacatgcgggcgctgagccacggttgcgtgcgccttgccgatccgcgc
gcgatggcggccgccgtgctcggcacgacgaccgacgacatcgccaagcagatcgccagc
ggccagaaccatgcggtccgcgtgccgcagaagatcccggtctacgtttcctacttcacc
gcctggccgaacaaggacggcgtggtggagtatttcgacgacgtctatggccgcgacgcc
tatgtcgacagggcttttgatgcgacgagcaaggcgcgtggggcgcagatctga
DBGET
integrated database retrieval system
