Rhizobium indicum: FFM53_000885
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Entry
FFM53_000885 CDS
T07009
Name
(GenBank) SPOR domain-containing protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rii
Rhizobium indicum
Pathway
rii00550
Peptidoglycan biosynthesis
rii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FFM53_000885
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rii01002
]
FFM53_000885
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rii01011
]
FFM53_000885
Enzymes [BR:
rii01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FFM53_000885
Peptidases and inhibitors [BR:
rii01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
FFM53_000885
Peptidoglycan biosynthesis and degradation proteins [BR:
rii01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
FFM53_000885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
QKK15024
UniProt:
A0ABX6P7U8
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Position
complement(189256..190827)
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AA seq
523 aa
AA seq
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MQAKSGIVSRSVSSVSSSRSGSFFARLLAVLSVAITIVVVDSVNADAEAANPKYAGIVVD
AKTGNVLYSENADRLQYPASLTKMMTLYMTFEALEQGRIRLDTPVPFSAHASAQAPTKLG
VRAGGTITVEQGILGLVTLSANDAATALGEMLGGGSEDRFAQLMTAKAHALGMTRTTYRN
ANGLPNTAQMTTARDQARLGIALRQHFPQYYGYFSTRAFKFGSRTIRSHNRLVGSVRGVD
GIKTGYTRAAGFNLVSSVQVDGKTIVGVVMGGASTPARDAQMRNLIATYLPKASSRGGSS
ALIAQAAPAPAMIVTPAPVQPKKAQQMAKTITAAQPPVSAAAADLSLPHKGPLPDARYQV
AETEVAYAETAAPNSDNPLVAQPMPAPTKVKTMTFKQQAAVAAPKPTPASMPTEQGETSV
DNLTTASTTPSPTRAASTSNGPTGWVVQVGVSPSRQMAMDLLEGAKSKGGKALASAKPFA
VAYAAGGDQLYRARFGGFDDQRDAVNACKALKKAGIKCWAAAQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgaagagtggaatagtgtcaaggtcagtctcctccgtatcatcgtcccgatcc
ggcagttttttcgcaaggctgctggcggtcctttcggtggccatcacgatcgttgtggtc
gattcggtgaatgccgacgcggaagcagcaaatccgaaatatgcaggcatcgtcgtcgac
gccaagaccggcaacgttctctacagtgagaacgccgaccggctgcaataccccgcctcc
ctgaccaagatgatgaccctctacatgaccttcgaggcattggagcagggtcgcatccgt
ctcgatacgccggttcccttctccgcccatgcgtcagcccaggcgccgaccaagctcggc
gtccgcgccggcggtacgatcaccgtcgagcagggcattctcggtctcgtcaccctgtcg
gccaatgatgcggcaacggcgctcggcgagatgctgggcggcggcagcgaggatcgcttc
gcccaattgatgaccgccaaggcgcatgcgctcggcatgacgcgcaccacctatcgcaat
gccaacggcctgccgaatacggcgcagatgacgacagcgcgcgaccaggcccgcctcggc
atcgcccttcgccagcatttcccgcaatattacggctatttctctacccgtgccttcaag
ttcggcagccggacgatccgcagccacaaccgcctggtcggttcagtgcgcggcgtcgac
ggcatcaagaccggttacacgcgggctgccggtttcaatctggtaagctcggtgcaggtc
gatggcaaaacgatcgtcggcgtcgtgatgggtggcgcctcgacgcctgcccgcgatgcc
cagatgcgcaatctgatcgccacctatctgccgaaggcatcgagccgtggcggatcgtcg
gcgctgatcgcccaggcagcccctgccccggcgatgatcgtgacgccagctccggtccag
cccaagaaggctcagcaaatggcgaagaccatcaccgcagcccagccgccggtttcggca
gccgctgccgatctcagcctgccgcacaaaggcccgctgccggatgcgcgctatcaggtc
gccgagaccgaggtcgcctatgccgagaccgctgcgccgaattccgacaatccgctggta
gcccagccgatgccggcgccgaccaaggtcaagaccatgaccttcaagcagcaggcagcg
gtcgccgcaccaaagccgacgcccgcatctatgccgacggaacagggcgagacgtcggtc
gataacctcaccactgcgtcgaccactccctccccgactcgtgctgcttcaaccagcaac
ggtccgaccggctgggtggtgcaagtcggcgtctcgccgagccggcagatggccatggac
ctcctggagggcgccaagagcaagggcggcaaggcattggcctcggcaaaacctttcgcg
gtcgcctacgccgctggtggtgaccagctttaccgcgcccgcttcggcggcttcgacgat
cagcgcgatgccgtcaacgcctgcaaggccttgaagaaggccggcatcaagtgctgggcg
gctgcccaatga
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