Rhizobium indicum: FFM53_001820
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Entry
FFM53_001820 CDS
T07009
Name
(GenBank) carbohydrate ABC transporter permease
KO
K17243
alpha-1,4-digalacturonate transport system permease protein
Organism
rii
Rhizobium indicum
Pathway
rii02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FFM53_001820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rii02000
]
FFM53_001820
Transporters [BR:
rii02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Alpha-1,4-digalacturonate transporter
FFM53_001820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QKK15204
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All DBs
Position
complement(383630..384679)
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AA seq
349 aa
AA seq
DB search
MSAVSAFLLRRRGRGWHWTDVVTWIWLISGVFLMFGPAVWLVFSSFKTPAALAEFPPSFL
PYVTEQAVVPGYDKPLPLYNVAMPDGSTRVLAEVRRIGIIGQMVDPKQPGEIVKANIKDR
TPVRQVEFAGGNYTEPFQRFDFFLFLRNSVFVTVVATAITLLVNSMAAFALSKYQFPGRT
AVMLMILATLMVPLSVIVVPLYSVIGTLNLFDSLWGVILPTVATPTGVFLLRQYMLTIPD
ELLDAARMDKASEWQIYWRIILPLSAPALAVLAIFSVVWRWNDFLWPLIVLSRKELYTLQ
VGLNVYAGELNVQWHYILAMTVVSMIPVVLIFVFLQRFITTGIAGSGLK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgtctctgcctttctgctccgccgccgaggacgaggctggcactggacggat
gtggtcacctggatctggctgatctccggcgtcttcctgatgttcggcccggccgtctgg
ctggtcttctcttccttcaagacgccggcggcccttgccgagttcccgccctccttcctg
ccctatgtcaccgaacaggcagtggtgccgggctacgacaagccgttgccgctctataat
gtcgcaatgccggatggcagcacacgtgtgctcgccgaagtgcgccgcatcggcatcatc
ggccagatggtcgatccgaaacagcccggcgaaatcgtcaaagcgaatatcaaggaccgc
acaccggtgcgccaggtcgaattcgccggcggcaactacaccgaaccgttccagcgcttc
gatttcttcctgttcctgcgcaactctgtcttcgtcaccgtcgtggcgacggccattacg
ctgctcgtcaattccatggccgccttcgcgctgtcgaaataccagtttcccggccgcacc
gccgtcatgctgatgatcctggcgacgctgatggtgccgctttcggtcatcgtcgtgccg
ctctattccgtcatcggcacgctgaacctcttcgacagcctctggggcgtcatcctgccg
acggtcgccaccccgacgggcgtcttcctgctcaggcaatacatgctgacgatccccgac
gaattgctcgacgccgcgcgtatggacaaggccagcgaatggcagatctactggcgcatc
atcctgccgctgtcggcgccggcgctggcggtgctggcgatcttctcggtcgtctggcgc
tggaacgacttcctgtggccgctgatcgtgctgtcgcgcaaggaactctatacgctgcag
gtcggccttaacgtctatgccggcgagctcaatgtgcaatggcattatatcctcgccatg
acggtcgtctcgatgatcccggtcgtgctgatcttcgtcttcctgcagcgcttcattacg
acgggcattgccggctcggggctcaaatag
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