Rhizobium indicum: FFM53_001880
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Entry
FFM53_001880 CDS
T07009
Symbol
kdgD
Name
(GenBank) 5-dehydro-4-deoxyglucarate dehydratase
KO
K01707
5-dehydro-4-deoxyglucarate dehydratase [EC:
4.2.1.41
]
Organism
rii
Rhizobium indicum
Pathway
rii00053
Ascorbate and aldarate metabolism
rii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
FFM53_001880 (kdgD)
Enzymes [BR:
rii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.41 5-dehydro-4-deoxyglucarate dehydratase
FFM53_001880 (kdgD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHDPS
Motif
Other DBs
NCBI-ProteinID:
QKK15215
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All DBs
Position
398134..399060
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AA seq
308 aa
AA seq
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MMNPIELKKAVGSGLLSFPVTHFDDQLKFDEAKYRRHVEWLSGYDAAALFAAGGTGEFFS
LNPAEIPQVVRAAKASAGKTPIISGTGYGTSLAIEIAVAAEKAGADGLLLLPPYLMFAEQ
AGLIAHVKAVCQSVGIGVIVYNRDNAVLTADSIARLAEECPNLIGFKDGVGDVDKVIEIT
TLLGDRLVYVGGMPTHEVYAQAYFAAGVTTYSSAVFNFVPALAQRFYGALRTGDQATVDE
ILKGFFFPFVALRNRKKGYAVSIIKAGLRVLGQNPGPVRPPLTDLTQDELALLEKIVQAN
GVTRIAAE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacccgattgaattgaagaaggccgtcggtagtggtctcctgtcgtttccggtt
acccatttcgacgatcaactcaaattcgacgaagccaaataccgccgtcatgtcgagtgg
ctttccggttatgacgctgcagcgctgtttgccgccggcggcaccggggagttcttctct
ctcaacccggccgaaattccgcaggttgtccgggcggccaaggcgtcggcgggcaagacg
ccgatcatttcgggaaccggctacggcacatcgctcgccatcgaaatcgcagtcgcggcc
gagaaggccggcgcggacggactgctgctgttgccgccttatctgatgtttgccgaacag
gcgggtctcatcgcccatgtcaaggcagtctgccaatcggtcggcatcggcgtcattgtc
tataatcgcgacaacgccgtcctgaccgccgacagcatcgcgcgcctggcggaggaatgc
ccgaacctgatcggcttcaaggacggcgtcggcgatgtcgacaaggtgatcgagatcacc
acgctgcttggcgaccgcctcgtctatgtcggcggcatgccgacccacgaggtttacgcc
caggcctattttgccgcaggcgtgacgacctattcatcggccgttttcaacttcgtgccc
gcgctcgcccagcgcttttacggcgccttgcgcaccggcgatcaggcgactgtcgatgag
atcctcaagggcttctttttccccttcgtcgccttgcgcaatcgcaagaagggatatgcc
gtctcgatcatcaaggccggccttcgtgtcctcgggcagaaccccggccccgtacgcccg
cctctgacggaccttacccaggacgaactcgcgctgctggaaaagatcgtccaggccaac
ggcgtcacacggatcgcggcggaataa
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