Rhizobium indicum: FFM53_004870
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Entry
FFM53_004870 CDS
T07009
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rii
Rhizobium indicum
Pathway
rii00521
Streptomycin biosynthesis
rii00523
Polyketide sugar unit biosynthesis
rii00525
Acarbose and validamycin biosynthesis
rii00541
Biosynthesis of various nucleotide sugars
rii01100
Metabolic pathways
rii01110
Biosynthesis of secondary metabolites
rii01250
Biosynthesis of nucleotide sugars
Module
rii_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FFM53_004870 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FFM53_004870 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FFM53_004870 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FFM53_004870 (rfbB)
00525 Acarbose and validamycin biosynthesis
FFM53_004870 (rfbB)
Enzymes [BR:
rii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FFM53_004870 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
QKK15758
UniProt:
A0ABX6P9N9
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Position
984172..985227
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AA seq
351 aa
AA seq
DB search
MRILVTGGAGFIGSALVRHLVSKIGAEVLNVDTLTYAGNLASLKSVEAAPNYQFLQADIC
DRAGMQEAFASFRPDIVMHLAAESHVDRSISGAADFIQTNIVGTFRLLDTARHYWDELDA
RRKSAFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV
VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANIRDWLYVEDHARALFTIASR
GRLGEKYNVGGRNERRNIDVVHRICAILDGVYQDNGPYARLITNVTDRPGHDARYAIDAS
KLESELGWKAQETFETGIEKTVHWYLENEWWWRPLRENVYSGERLGVFKGR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatactggtcacgggcggagcgggcttcatcggatcggcattggtgcgccatctc
gtcagcaagatcggcgccgaggtgctgaatgtcgacacgctgacctatgccggcaatctg
gcgtcactgaaatccgtcgaagcggcgccgaactatcaattcctgcaggccgacatctgc
gaccgcgccgggatgcaggaagcattcgcgtccttccgccctgatatcgtcatgcatctc
gcggccgagagccatgtcgaccgctcgatctcgggcgcagccgatttcattcagaccaac
atcgtcggcacattcaggctgctggataccgcacggcactattgggatgagcttgacgct
cgccgcaagagtgccttccgctttctgcatgtctcgacagacgaggtctacggctcgctc
ggcgacgagggcctcttcgaggagacgacgccttacgatccgtcctcgccctactctgcc
tccaaggccgccagcgaccatctggcgatcgcctggcaccgaacctacggcctgcccgtc
gtcgtctccaattgctccaacaactacggcccgttccatttccccgaaaagctcattccg
ctaatgatcctgaacgcactggagggcaagcctcttccggtttacggcaatggcgcgaat
atccgcgactggctctatgtcgaagaccacgcccgcgcgctcttcacgatcgcttcccgg
ggccggctcggcgagaaatacaacgtcggcggccgcaacgagcgcaggaacatcgatgtc
gttcatcgcatctgcgccattctcgacggcgtctaccaagacaacggaccgtatgcgcgt
ctgatcaccaacgtcacggatcgccccggacacgacgcacgctatgcgatcgacgcctcg
aaactcgaaagcgagctcggctggaaggcacaggaaaccttcgagactggcatcgaaaag
accgtgcactggtacttggaaaacgaatggtggtggaggccgctgcgcgaaaacgtctac
tccggcgaacgcctcggcgttttcaagggacgataa
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