Rhizobium indicum: FFM53_004900
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Entry
FFM53_004900 CDS
T07009
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rii
Rhizobium indicum
Pathway
rii00260
Glycine, serine and threonine metabolism
rii00460
Cyanoamino acid metabolism
rii00630
Glyoxylate and dicarboxylate metabolism
rii00670
One carbon pool by folate
rii00680
Methane metabolism
rii01100
Metabolic pathways
rii01110
Biosynthesis of secondary metabolites
rii01120
Microbial metabolism in diverse environments
rii01200
Carbon metabolism
rii01230
Biosynthesis of amino acids
rii01240
Biosynthesis of cofactors
rii04981
Folate transport and metabolism
Module
rii_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FFM53_004900
09102 Energy metabolism
00680 Methane metabolism
FFM53_004900
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FFM53_004900
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FFM53_004900
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FFM53_004900
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FFM53_004900
Enzymes [BR:
rii01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FFM53_004900
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QKK15764
LinkDB
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Position
complement(989529..990827)
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AA seq
432 aa
AA seq
DB search
MTNASTESFFNRSLADVDPDIFGAIGKELGRQRHEIELIASENIVSRAVLEAQGSIMTNK
YAEGYPGKRYYGGCQFVDIAEELAIERAKKLFGVNFANVQPNSGSQMNQAVFLALLQPGD
TFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVARKAEETKPKLIIAG
GTAYSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGVHPSPFPHCHVATTTTHKSLRG
PRGGVILTNDEDLAKKFNSAVFPGLQGGPLMHIIAAKAVAFGEALQPEFKEYAAQVVKNA
KALAETLVAGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEK
PFVTSGVRLGAPAGTTRGFKEAEFREIGNLIVEVLDGLKVANSDEGNAAVEAAVRGKVVS
LTDRFPMYGYMG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgcttccaccgaatccttcttcaatcgctcgcttgcggacgtcgatccggac
attttcggcgcgatcggaaaggaactcggtcgccaacggcacgagatcgaactgatcgct
tctgagaatatcgtctcccgcgccgtgctggaagcccagggttccatcatgaccaacaaa
tatgccgagggttatcccggcaagcgttattacggtggctgccagttcgtcgatatcgcc
gaggagctggcgatcgagcgcgccaagaagctgttcggcgtcaatttcgccaacgtccag
ccgaattccggttcgcagatgaaccaggccgtgttcctggcgctgctgcagcccggcgat
acctttatggggctcgacctgaattcgggcggccacctcacgcatggttcgccggtcaac
atgtccggcaagtggttcaacgtcgtctcctacggcgtgcgcgaaggcgacaacctgctc
gacatggatgaagtagcccgcaaggccgaggaaaccaagccgaagctcatcatcgccggc
ggcactgcctattcccgcatctgggactggaagcgcttccgcgagatcgccgactcggtt
ggcgcctacctcatggtcgacatggcccacatcgccggcctagtcgccggtggcgttcat
ccgtcgccgttcccgcattgccatgtcgcgacgacgacgacccacaagtcgctgcgcggc
ccgcgcggcggcgtcatcctcaccaatgacgaggatctggcgaagaagttcaattcggct
gtcttccctggtctgcagggtggcccgctgatgcacatcatcgccgccaaggccgttgcc
ttcggcgaggcgctgcagccggaattcaaggaatacgccgcacaggtcgtcaagaatgcc
aaggcactggctgaaacgcttgtcgccggcggcctcgatgtcgtctccggcggcaccgac
aaccacctgatgctggtcgacctgcgcaagaagaatgccaccggcaagcgcgccgaggca
gccctcggccgcgcctacgtcacctgcaacaagaacggcattcccttcgatccggaaaag
cccttcgtcacctcgggtgtgcgcctcggcgcgccggccggcacgacccgcggcttcaag
gaagcggaattccgcgagatcggcaatctgatcgtcgaggtcctcgacggtctgaaggtc
gccaattccgatgaaggcaacgccgccgtcgaagccgctgtgcgcggcaaggtggtcagc
ctcaccgaccgcttccccatgtacggctacatgggataa
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