Rhizobium indicum: FFM53_005335
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Entry
FFM53_005335 CDS
T07009
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
rii
Rhizobium indicum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Big_13
Big_3_5
PycTM
TgpA_N
DUF6130
Motif
Other DBs
NCBI-ProteinID:
QKK15847
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Position
1082451..1084475
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AA seq
674 aa
AA seq
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MMKNRAGLLALAVLAIAILLMVFVVMPRIGGDATKVGDAINQASTEVKNTVNEAAKTSRS
AVGDAAAVADKVGRLSADAGVSLSELKALFADGKGPAIDVFTAAKTKAVNALTALADFTI
PEGLDPATQTLAAKAKDGGAKALAIVQSLPENIADALAAIAKAEVALTGAPETAPGANTA
AENTGPKLPAFDVLRVEPDGSTVIAGSAEPNGKLEVLDGEKVVTTANVDASGDFAAVLDD
PLPAGDHQLVLKFTGKDGKSTLSEEVATISVPKDGNGANLLAMVSKPGTASRIITAPKAG
TEVADASNPMAPPADKPATGESSDAPAATAAPTGELALQTPNLTDTSSDGAATAPDKTNV
PDVMVNAVEIEGNKIFIAGTTRSNAKVIGYADDSLVGQDTAGSDGHFVIDGVVALSVGDH
KIRVDVVDPTGKVIVRAAVNFNRPAGDQVRVAAQSAPADANGASSMVPLDEGELDKLKVE
VGKAFGLLKGLFADGKLPGAEQLAAARSATEFALRSVADFRPAADAPDVFKQASGSSSQI
AGNALKLLQGLPGDAKSVGAALERLGGMIAELTAAPAPATPSANEVGSNQPKTIEQAPLT
ANNAAVIIRRGDTLWQISRRTYGLGVRYTTIYIANEDKIINPDRIRPGQIFGLPKDVLPN
AEELHRKRMSGQHL
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaaccgtgccggcttgctggctcttgcagtcctcgcaatcgcaatcctactg
atggtgtttgtcgtcatgccgcgcatcggcggcgatgcaaccaaggtcggagatgccatc
aaccaggcgagcacggaggtcaagaacacggttaacgaggcggcaaagacatcgcgctcc
gccgtgggcgacgcggctgcggtcgccgacaaagtgggtcgcctttcggccgatgccggc
gtatcgctcagcgagctcaaggcgctgtttgccgacggcaaaggcccggccatcgatgtc
ttcaccgccgccaagaccaaggccgtcaacgcgctgaccgcgcttgccgattttaccatt
cccgagggcctcgatcccgcgacccagacccttgccgccaaggccaaggacggtggcgcg
aaggcgctcgccatcgtccagtcgctgcccgagaacatcgccgatgcgcttgccgcgatc
gccaaggccgaggttgcactgaccggtgcgccggagaccgcccctggggcgaatacggca
gcggaaaataccggcccgaagcttccggccttcgacgtattgcgcgtcgagcccgacgga
tcgacggtgattgccggttccgccgagccgaacggcaagctcgaggtgctcgacggcgag
aaggtggtgacgacggccaatgtcgacgcgagcggcgattttgctgccgtcctcgacgat
ccgcttccggccggcgaccaccagctcgtgctcaagttcacgggcaaggacggcaagagc
acgctttccgaagaagtcgcgaccatttccgtgccgaaggatggcaatggcgccaatctg
ctcgccatggtttccaaacccggcacggcgagccgcatcattaccgcgccgaaggctgga
accgaagttgcggatgcctccaatccgatggcgccgcctgcggacaagccggcaaccggc
gaaagctcggatgcgcctgccgcaacagctgcaccgaccggcgagctggcgctgcagacg
ccgaacctcaccgacacctcctcggatggcgcagctacggcaccggataaaacgaatgtg
cccgatgtgatggtcaatgccgtcgaaatcgagggcaacaagatcttcattgccggcacg
acgcgctccaatgccaaggtcatcggttatgccgacgacagcctcgtcggccaggacacg
gccggctccgacggccatttcgtcatcgacggtgtggtggcgctttcagtcggcgaccac
aagatccgcgtcgatgtcgttgatcccacaggcaaggtgatcgtgcgtgcggcggtgaat
ttcaatcgcccagccggcgatcaggtgagggtcgccgcgcaatcggcacccgccgacgcc
aacggcgcttcctcgatggtgccgctcgacgaaggcgagctcgacaaactcaaagtcgaa
gtcggcaaagccttcggcctgctgaagggactgtttgccgatggcaagctgcccggtgcc
gaacagcttgcggcagcgcgctcggcaacggaattcgcgctgcgctccgtcgccgacttc
cgcccggccgctgatgcgccagatgtcttcaagcaagcgtccggttcctcctcgcagatt
gccggcaatgcgctgaagctgctgcagggcctgcctggggacgcgaagtccgtcggtgcc
gcgctcgaaagactgggcgggatgatcgccgaactcaccgctgcacccgcgccggcaacg
ccatctgcaaacgaggtcggaagcaaccagccgaagacgatcgaacaggcgccgctgacg
gcgaacaatgcggcggtcatcattcgccgcggcgacacgctgtggcagatctcgcgccgc
acctatggcctcggcgttcgttacacgacaatctacatcgccaacgaggacaagatcatc
aatcccgatcgcatccgccctggccagattttcggcctgccgaaggatgtactgccgaac
gccgaagagctgcaccgcaagcgcatgtccggccagcatctctaa
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