Rhizobium indicum: FFM53_005490
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Entry
FFM53_005490 CDS
T07009
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rii
Rhizobium indicum
Pathway
rii03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FFM53_005490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rii03021
]
FFM53_005490
03400 DNA repair and recombination proteins [BR:
rii03400
]
FFM53_005490
Enzymes [BR:
rii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FFM53_005490
Transcription machinery [BR:
rii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FFM53_005490
DNA repair and recombination proteins [BR:
rii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FFM53_005490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DACNK
MinE
Motif
Other DBs
NCBI-ProteinID:
QKK15878
LinkDB
All DBs
Position
complement(1110639..1111043)
Genome browser
AA seq
134 aa
AA seq
DB search
MARVTVEDCIDKVENRFELVLLASHRARLISQGASITIDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEPDPASMIAAGGVAAADSEEQDDVPETITFDQMSEEELLA
GIEGLVPPEKSDDY
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtcacagttgaagattgcatcgacaaggtggagaaccgcttcgagctggtt
ctgctcgccagccaccgcgcccggctgatttcccagggtgcctcgatcaccatcgatcgc
gataacgacaagaatcctgtggtggccttgcgcgaaattgccgatgagacgctttcgccc
gatgacctcaaggaagatctgatccattcgctgcaaaagcatgtcgaagtcgacgaaccc
gagcccgatccggcaagcatgatcgccgccggcggtgtcgccgcagccgacagcgaagag
caggacgatgtgccggagacgatcactttcgaccagatgtcggaagaagagctgcttgcc
ggcatcgaaggcctcgtgccgccggaaaagagcgacgattactaa
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