Rhizobium indicum: FFM53_008955
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Entry
FFM53_008955 CDS
T07009
Name
(GenBank) autotransporter domain-containing protein
Organism
rii
Rhizobium indicum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
HopW1-1
Motif
Other DBs
NCBI-ProteinID:
QKK16521
LinkDB
All DBs
Position
complement(1789352..1792444)
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AA seq
1030 aa
AA seq
DB search
MGERMCGAAIHGMAMLRLAGLASTAALVLAVQPGWAQVITGNDTEIVDGNDPGGAGPGTQ
PSPWTINTDLLVGDQNGDDAALIIRNGGAVSNDIGVLGVDPGASGTVTVTGAGSTWTNAD
DLYIGNEGTGTLTIENGGAVDNINGYIGYFSAAASGTVTVTGSGSTWTNSQDLTIGDSGA
GTLIISNGGTVNSASGYISNDSTAIGEVIVTGPNSVWSNSTEVSVGTAGAGSLTISNGGS
VTGSLGYVGFSTNGSGVVSVTGTGSSWISSSALFVGEFGSGSVTVENGGMISASGVVIAD
DSGATGTVELVGSAGSGRGVLETGYIDRGAGDAGLVFDGGVLRATGNEANFLGGFNAGDV
MLDAGGAFIDTNGFAIGIGTDLQGAGGLTKQGAGTLTLSGANSYGGATTVGAGTLQAGGA
GAFVQNGAYAVNGGILDLGGFDLTMGALSGSSGEIAIGGAELKLDQASSSTYGGILSGSG
DFTMLGNGTLRLTGNSSGFTGTTTVADGRLIVNGSLGGILMMTGGTLAGSGHLGAVTAGA
GATIAPGNSIGTLTIGGNLTFDPSSTYEVEVDPGSTASDLILVTGTAFLNGASVTHVGMN
GDYQPFSTYTILTAAGGINGTFGAVTSNYAFLSADLSYDPNNVYLEIERNDISFSDMART
RNQIAAAEAAENLGTGNDIYDAIVTLPDDEPLIQASYDALSGEIHASLKTALITQSLFVR
EAANERLRSAFGDAGAGVIPIQAFWPGGPELIAADPSDAPVFWSTAFGGASETRTDGNAA
TLNHQTGGFLAGVDAMFDDVRLGLMAGYSNSQFDPRHRSSSGSSDDYHLGLYAGTQWGGL
AFRSGVAHTWHEIETSRRVAIGSFEDRLEASYNAGTLQAFAELGYQFDTAAASFEPFVNL
AHVGIRTAGFTEEGGAAALHSSSRMTNTTITTLGLHAEMEIRLGETNATLRGMSGWRHAA
GDIVPLSTQAFAGGDAFTVAGVPVAENALVLDAGLDFDLTGSAILGIAYSGQIADNAQQH
GVKAALSVKF
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaaggatgtgtggagcggcaatccatgggatggccatgctgcgacttgcgggt
ttggcgagcactgcggcgctggtcctggccgtgcagccgggatgggcgcaggtcatcacc
ggcaatgacacggagatcgtcgatggcaacgatccgggcggtgccggcccgggcacgcaa
ccgagcccatggacaatcaataccgacctcctcgtgggcgaccagaacggcgacgacgca
gcccttatcatccgcaatggcggcgccgtcagcaatgacatcggcgtgctcggcgtcgac
ccgggcgccagcggcacggtgacggtcacgggggcaggctcaacctggaccaatgccgac
gacctttatatcggcaatgaaggcaccggcacgctcaccatcgaaaacggaggtgctgtc
gacaatatcaacggttatatcggctatttctccgccgctgccagcggcacggtgacggtg
acaggcagcggctcgacctggacgaattcgcaggatctcaccatcggcgatagcggcgcc
ggtactctgatcatttccaatggcggaacggtcaacagcgcgtccggctatatcagcaat
gattccaccgccatcggcgaggtcatcgttaccggcccgaactcggtctggagcaactcc
accgaagtctcggtcggcacggccggcgcgggatcactgaccatttcgaacggcggctcg
gtcaccggcagcctgggttatgtcggcttcagtacgaacggcagcggcgtggtcagcgtg
acgggcacgggatcgagctggatcagttccagcgcgttgtttgtcggcgaattcggctcg
ggcagcgtgacggtcgagaacggcggcatgatttcggcttccggggttgtcatcgccgac
gattcgggcgccacgggaacggtagaacttgtcggcagcgccggaagcggacgcggcgtc
ctggagaccggttatatcgacaggggcgccggtgacgccgggctcgtcttcgatggcggt
gttctgcgtgcaacgggcaatgaggcgaatttcctgggcgggttcaacgccggagatgtc
atgctcgatgcgggcggcgcctttatcgacaccaatggctttgccatcggcattgggacg
gatctgcaaggtgccggcggtttgaccaagcagggcgccggcacgctgacgctgtcgggc
gccaacagttatggcggtgcgacgacggttggggccggcacgttgcaggcgggcggcgcc
ggcgccttcgttcagaacggcgcctatgcggtcaatggcggtatactcgatctcggcggc
ttcgatctgaccatgggagcgctttcgggaagcagcggcgagatcgccatcggcggcgcc
gaactcaagctcgatcaggcgagcagcagcacctatggcggcatactctccggcagcggc
gacttcaccatgctgggcaacggcaccttgcgtctgaccggcaacagttcaggctttacc
ggcaccaccacggttgcggacggacgcctgatcgtcaacggcagccttggcggcatcctg
atgatgacgggcggcacgctggccggctcgggtcatctcggtgcggtgaccgccggcgcc
ggcgccaccatcgcgccgggcaactccatcggaacattgaccatcggcggtaacctcacc
ttcgatcccagttccacctatgaagttgaggtggatcccggcagcactgccagcgacctc
atcttggtcacggggaccgcgttcctcaatggcgccagcgttacccatgtcgggatgaat
ggcgactaccagcctttctccacctatacgatccttaccgccgccggcgggatcaacgga
acattcggcgccgtcacctccaattacgccttcctctcggcggatctctcctatgatccg
aacaacgtctatctggagatcgaacgcaacgacatcagtttcagcgacatggcacggacg
cgcaaccagattgccgcggcagaggctgcagagaatctcggaactggcaacgatatctac
gatgccatcgtcacattgcccgatgacgagccgttgatccaggcgagttacgacgcgctt
tccggtgaaattcatgcctcgctaaaaaccgcgctgatcacgcaaagcctctttgtccgc
gaggccgccaacgagcgcctgcgttccgcgttcggcgatgccggtgccggcgtaatcccg
attcaggctttctggccgggcggtccggaactcatcgctgccgatccttcggacgcgccg
gttttctggagcacggcctttggcggcgcaagcgagacacgcacggacggcaatgccgcc
accctcaaccaccagaccggcgggtttctcgccggcgtcgacgccatgttcgatgacgtc
aggctcggcctgatggccggttacagcaattcccaattcgatccgcggcatcgaagctca
tcgggatcgagcgacgattatcatctcggcctttacgccggtacgcaatggggcggtctc
gccttccgctccggcgtcgctcacacatggcatgagatcgaaaccagccgccgcgtcgcc
atcggaagcttcgaggacaggctggaggcgagctataatgccggcacgctgcaggcattt
gcggagctgggctatcagtttgatacggcggcggcctctttcgagcccttcgtcaatctc
gctcatgtgggtattcgaacggcgggtttcaccgaagagggcggggcggctgcgctccac
agctccagccgcatgaccaacaccacgatcaccacgcttgggctgcatgctgaaatggag
atccgcctgggtgagacgaacgccaccctgcgcggcatgtcaggctggcggcacgccgcc
ggcgacatcgttccgctgtcgacgcaggcttttgccggaggcgacgcgttcaccgtcgcc
ggcgtgccggtggcagagaacgccttggttctcgacgccgggctcgacttcgacctcacc
ggaagcgccatcctcggcatcgcctattccggccagattgccgataacgcgcagcagcat
ggggttaaagcggcgctgtcggtgaaattctag
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