Rhizobium indicum: FFM53_009925
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Entry
FFM53_009925 CDS
T07009
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rii
Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rii03000
]
FFM53_009925
Transcription factors [BR:
rii03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FFM53_009925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_Crp_2
HTH_38
HTH_58
Vit_b-sht_shell
Motif
Other DBs
NCBI-ProteinID:
QKK16704
LinkDB
All DBs
Position
2000912..2001931
Genome browser
AA seq
339 aa
AA seq
DB search
MTTSIRHIAKLAGTSVSSVSRVLNNSGYASPELRDRVEAAIRTLNYTPSKGARMLRGAPS
RMIGLMLPSIEVPFFGILAHAIEQELFQQGYQTLICSTAENMDHEVRYISMLLAQRVDGV
IVASAFGSTEHFGVLRDAHIPIIAIDRELSGIADDAVMADHEEGGRLMARHLIDLGHRAI
AIVGAPAHSQPIQLRLQGITAEMAKDGIAPAIVAMAEEHSFAETYRLARELLASRPEVTA
IIGTTDVSAIAAIHAVQDRGFSVPGDYSVVGFDDLPEAAYVFPRLTTVAQPIRDVGRQAA
RLLEALIDEHQTGDESRQGAIVKVPVTLIERDSTGRVRN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccagcatcagacatatcgctaaacttgcaggaacatcggtctcttcggtctcg
cgcgtgctcaacaacagcggctatgcctcacctgagctcagggaccgggtcgaggcggct
atccgaacgctgaactacacgcccagcaagggcgcccgtatgctgcgcggtgcaccaagc
cggatgatcggactgatgctgccgtcgattgaagtgcctttcttcggcatcctcgcccat
gcgatcgaacaggaactgtttcagcagggctatcagacgctgatctgcagcacggcggaa
aatatggaccatgaggtgcgctacatctccatgctgctcgcccagcgcgtcgatggcgtc
atcgtggcaagcgccttcggcagcaccgagcatttcggagtgctgcgtgacgctcacatt
ccaatcatcgccattgaccgcgagttgagcggcatcgccgacgacgctgtcatggccgat
cacgaggaaggcggacggctgatggcgcgccatctgatcgacctcggccaccgggcgatc
gccatcgtcggcgcgccggcacacagccagcctatccagcttcgcctgcaaggcatcacg
gccgagatggcgaaagatgggatcgcacccgccatcgtggcgatggcagaagagcacagc
tttgcagagacctaccggctggcgcgcgagctgctggcgtctcgacctgaggtcaccgca
atcatcggcacgaccgatgtttcggcgattgccgcaatccatgccgtccaggatcgcgga
ttttccgttccgggcgactattcggtcgtgggcttcgacgatctgcccgaggcagcctac
gtctttccacggctgacaacggtcgcacagccgatccgcgatgtcgggcgacaggcagca
cggctgctggaagcgctgatcgacgagcaccaaacgggagacgaatctcgacagggcgcg
atcgtaaaagtgccggtcacgctgatcgagcgcgattccaccggtcgcgtccgcaactga
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