Rhizobium indicum: FFM53_010690
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Entry
FFM53_010690 CDS
T07009
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rii
Rhizobium indicum
Pathway
rii00061
Fatty acid biosynthesis
rii00071
Fatty acid degradation
rii01100
Metabolic pathways
rii01212
Fatty acid metabolism
rii02024
Quorum sensing
rii04146
Peroxisome
Module
rii_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FFM53_010690
00071 Fatty acid degradation
FFM53_010690
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FFM53_010690
09145 Cellular community - prokaryotes
02024 Quorum sensing
FFM53_010690
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rii01004
]
FFM53_010690
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rii04147
]
FFM53_010690
Enzymes [BR:
rii01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FFM53_010690
Lipid biosynthesis proteins [BR:
rii01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FFM53_010690
Exosome [BR:
rii04147
]
Exosomal proteins
Exosomal proteins of breast milk
FFM53_010690
Exosomal proteins of breast cancer cells
FFM53_010690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QKK16847
UniProt:
A0ABX6PFG1
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All DBs
Position
2155889..2157589
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AA seq
566 aa
AA seq
DB search
MNSISVHPNGAKPDKPWLAAYPDIVPAEIPPLEYASLAELLEKSCARYADRTAFSSMGKA
MRYRELESQTRKLAAWLQSTGLQKGDRVAVMMPNVLQNPIATYAILRAGLVVVNVNPLYT
PRELEHQLRDSGAKAIFVLENFARTVEQVLNKTDLRHVVVTSLGEMLGPKGLIVNFVVRK
VKKLVPSWSIPQHKSFGQVLREGAGKKLQPVTLTGSDIAFLQYTGGTTGVAKGAVLTHEN
LLANKLQLSLWLRSAFERKKEPEVLNFLCALPLYHIFALTVNSLMGMSHGAHNILIANPR
DIPGLVKEFEKSKVHIFPGLNTLFNALMNNADFAKLDFSSLIMSLGGGMAVQRPVAERWL
KMTGTAVTEGYGLSETSPVATANRFDSPEFTGTIGLPLPSTDLDIRDEDGNSLPLGQVGE
ICIRGPQVMAGYWQKPEETARVMTDDGYFRSGDMGFMDERGYTKIVDRKKDMILVSGFNV
YPNEIEEVAAMHAGILEAAAIGVPDGHSGEAVKLFVVRKDPNLTEAEVKAHCIANLTNYK
RPRFIEFRTELPKSPVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcatttccgtccatccgaacggagccaagcccgacaagccctggcttgcggcc
tatcccgatatcgttccggcagagattccgccgctggaatatgcctcgcttgccgaactg
ctcgaaaaatcctgcgcccgttacgccgaccggaccgccttttccagcatgggtaaggcg
atgcgttaccgcgagctggagagccagacgcgcaaactcgccgcctggctgcaaagcacc
ggccttcagaagggcgaccgcgtcgccgtgatgatgccgaacgtgctgcagaacccgatc
gcgacctacgccatcctgcgcgccggcctcgtcgtcgtgaacgtcaacccgctctatacg
ccgcgcgagctcgaacatcagttgcgggattccggcgccaaggcgatcttcgtgctggag
aattttgcccgcacggtggagcaggtcctcaacaagaccgatctccgccatgtcgtcgtc
acctcgcttggggaaatgctggggccgaaggggctgatcgtcaatttcgtcgtgcgcaag
gtgaagaagctcgttccctcctggtcgatccctcagcacaagagcttcggccaggtgctg
cgcgaaggtgcgggaaaaaagctccagccggtcacgctgacgggcagcgacatcgccttc
ctgcaatataccggcggcacgacgggcgtcgccaagggcgcggtgctgacgcatgaaaac
ctgctcgccaacaagctgcagctgtccctctggctgcgatcggccttcgagcgcaagaaa
gagccggaggtgctgaatttcctctgcgccctgccgctctaccacatcttcgcgctgacg
gtgaattcgctgatgggcatgtcgcatggcgcccacaatatcctgatcgccaatccgcgc
gacattcccggtctcgtcaaggaattcgaaaaatcgaaggtgcatatcttccccggcctc
aacacgctgttcaatgcgctgatgaacaatgccgatttcgccaagctcgatttctcgtcg
ctgatcatgtcgctcggcggcggcatggccgtgcagcgtccggtcgccgaacgctggctg
aagatgacgggcacggcggtgacggaaggctacggcctttccgagacatcgcccgttgcc
actgccaaccgcttcgattcgcctgagttcaccggcacgatcggcctgccgcttccctcc
accgacctcgatatccgcgacgaggacggcaattcgctgccgctcggccaggtcggtgaa
atctgcatccgcgggccgcaggtgatggccggctactggcagaagccggaagagacggcg
cgggtgatgaccgacgacggctacttccgctcgggcgacatgggtttcatggacgagcgc
ggctataccaagatcgtcgaccgcaagaaggacatgatcctggtctcgggcttcaacgtc
tatccgaacgagatcgaggaggtcgccgccatgcacgccggcatcctcgaggccgcggcc
atcggcgtgccggacggacattcgggcgaagcggtaaaactcttcgtggtcaggaaggat
ccgaacctgacggaagccgaggtgaaagcccattgcatcgccaacctcaccaactacaaa
cgcccgcgcttcatcgaattccgcaccgagctgccgaagtcgccggtcggcaagatcctg
cgcaaggacctgcgcggctga
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