Rhizobium indicum: FFM53_011050
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Entry
FFM53_011050 CDS
T07009
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rii
Rhizobium indicum
Pathway
rii00300
Lysine biosynthesis
rii01100
Metabolic pathways
rii01120
Microbial metabolism in diverse environments
rii01230
Biosynthesis of amino acids
Module
rii_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FFM53_011050 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rii01002
]
FFM53_011050 (dapE)
Enzymes [BR:
rii01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FFM53_011050 (dapE)
Peptidases and inhibitors [BR:
rii01002
]
Metallo peptidases
Family M20
FFM53_011050 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QKK16912
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Position
2223749..2224942
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AA seq
397 aa
AA seq
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MTATDPVANLQTLIRCPSVTPAEGGALSALEAMLAPLGFSVDRVKASEAGTPDIENLYAR
LGKDGPHLMFAGHTDVVPVGDEAAWTHPPFEAQISKGELFGRGAVDMKGGIACFVAAVAR
HIEKNGPPAGSISFLITGDEEGPAINGTIKLLQWAAERGERWDACLVGEPTNPDRLGDMI
KIGRRGSLSGKITVHGVQGHAAYPHLADNPVRGMLQLTQALMDPPFDGGTDDFQPSNLEV
TTVDVGNPATNVIPAKASASFNIRFNDSWTVEKLRAEILRRLDAAARDGALRPGRQPVAY
DIVWADRPSHVFLTRNNALIASLSSAVESISGQSPRLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAVADLETLTAIYETFIARWIANAGL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctaccgaccccgtcgccaatctccagacgctgattcgctgcccgtccgtgacg
cccgccgaaggcggcgcactgtcggcgctggaggcgatgcttgcgccgctcggcttttct
gtcgacagggtgaaggcgagcgaagccggaacacccgacatcgaaaacctctatgcccgc
ctcggcaaggatggcccgcatctgatgtttgccggccataccgatgtcgtgccggtcggc
gacgaagccgcctggacgcatccgccgtttgaggcccagatttcgaagggcgagcttttc
ggccgcggcgccgtcgacatgaagggcggcatcgcctgtttcgtcgccgccgtcgcccgc
catatcgagaaaaacgggccaccggccggctcgatctccttcctcatcaccggcgacgaa
gaaggtccggcgatcaacggtacgatcaagctgctgcaatgggcggccgagcgcggcgag
cgctgggatgcctgccttgtcggagagccgaccaatccggacaggctcggcgacatgatc
aagatcggccggcgcggctcgctgtcgggtaaaatcaccgttcacggcgtgcagggccat
gccgcctatccgcatcttgccgacaatccggtgcgcggcatgctgcagctgacccaggcg
ctgatggacccgccgtttgacggcggcaccgacgatttccagccgtcgaacctcgaagtg
accacggtcgatgtcggcaatccggcgaccaacgtcattccggccaaggcatcggcaagc
ttcaacatccgcttcaacgacagctggaccgtcgaaaagctgcgtgccgaaatcctgcgc
cgtctcgatgccgccgcccgggatggcgccttgcggccgggccgccaaccggtggcctat
gatatcgtctgggccgatcggccgagccatgtcttcctgacgcgcaacaatgcgctgatc
gcctcgctgtcttcagccgtcgaaagcatttccggccagtcgccgcggctttcgaccacc
ggcggcacatcggatgcgcgcttcatcaaggattattgcccggtcgtcgagttcggcctc
gtcggccaaacgatgcacatggtcgacgagcgcgtcgctgtcgccgatctggagacgctg
acggcaatctacgaaaccttcatcgcccgctggatcgccaatgccgggctttag
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