Rhizobium indicum: FFM53_011145
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Entry
FFM53_011145 CDS
T07009
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rii
Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rii03032
]
FFM53_011145
03036 Chromosome and associated proteins [BR:
rii03036
]
FFM53_011145
03400 DNA repair and recombination proteins [BR:
rii03400
]
FFM53_011145
DNA replication proteins [BR:
rii03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FFM53_011145
Chromosome and associated proteins [BR:
rii03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FFM53_011145
DNA repair and recombination proteins [BR:
rii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FFM53_011145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
QKK16929
UniProt:
A0ABX6PDA8
LinkDB
All DBs
Position
2242802..2243101
Genome browser
AA seq
99 aa
AA seq
DB search
MIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALAAGNRVELRGFGAFSVKNRPSRS
GRNPRTGDTVFVEEKWVPFFKTGKELRERLNPGQSDEED
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagtccgaattggtgcagatcgttgcggcacgcaacccgcatctctatcatcgc
gacgtcgaaaatatcgtcaacgcggttctcgacgagatcacggatgcactggctgcgggt
aaccgagtcgaattgcgcggctttggcgccttttcggtgaagaaccgcccttcgcgctcc
ggccgcaatccgcggaccggcgataccgtcttcgtcgaggagaagtgggttcccttcttc
aagaccggcaaggagctgcgcgagcggcttaatcccggccagtccgacgaagaggattga
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