Rhizobium indicum: FFM53_012065
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Entry
FFM53_012065 CDS
T07009
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rii
Rhizobium indicum
Pathway
rii00521
Streptomycin biosynthesis
rii00523
Polyketide sugar unit biosynthesis
rii00541
Biosynthesis of various nucleotide sugars
rii01100
Metabolic pathways
rii01110
Biosynthesis of secondary metabolites
rii01250
Biosynthesis of nucleotide sugars
Module
rii_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FFM53_012065 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FFM53_012065 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FFM53_012065 (rfbC)
Enzymes [BR:
rii01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FFM53_012065 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF6222
Motif
Other DBs
NCBI-ProteinID:
QKK17109
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Position
2414670..2415212
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AA seq
180 aa
AA seq
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MKFLPTAVSGAFVVEVDVRSDDRGMFARTFDAQTFAAQGLVPVYPQCNVSQNHKRGTLRG
MHYQAQPRPEIKLVRATRGRVFDVALDLRPDSPSYLKWASVELDAISHNAFYIPAGCAHG
FLTLEDDCELFYQMSETYVPKLARGVRWDDPAFSIAWPFMPSIISERDAALESYSQETSL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccttccgaccgcggtttcgggtgcttttgtcgtggaagtcgacgtacgctcc
gacgaccggggaatgttcgcacgaaccttcgacgcgcagacctttgcggcgcagggtctc
gtgcccgtctatccgcagtgcaatgtctcgcagaaccacaaacgcgggacgctgcgcggc
atgcattaccaagcccaaccgcggccggagatcaagctggtgcgcgccacgcgcggcagg
gtctttgacgtggccctcgatctaaggccggattcgccaagctatctcaaatgggcctcc
gtcgagctcgatgccatcagtcacaacgccttctacatacctgctggatgcgcgcacggc
ttcctgacgctcgaggatgattgcgaactcttctaccagatgtcggaaacctacgtgcca
aagcttgcccgcggggtccgctgggacgatcctgccttttccatcgcctggccgttcatg
ccgagcatcatcagcgagcgcgacgcggcgcttgagagctacagccaggagacaagcctt
tga
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