Rhizobium indicum: FFM53_012680
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Entry
FFM53_012680 CDS
T07009
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rii
Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rii03016
]
FFM53_012680 (truB)
Enzymes [BR:
rii01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FFM53_012680 (truB)
Transfer RNA biogenesis [BR:
rii03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FFM53_012680 (truB)
Prokaryotic type
FFM53_012680 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QKK17227
UniProt:
A0ABX6PDR6
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All DBs
Position
2541657..2542589
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AA seq
310 aa
AA seq
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MSKPRKPKGRPISGWLILDKPVDFGSTEAVSKIKWLYKAEKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVSWGEERATDDLEGEVTKSSDKRPSEQQIRDILPGYIGTI
SQVPPQFSAIKISGERAYDLAREGETVEIPSREVDIFRLTLLACPDADSAHFEVECGKGT
YVRALARDFGRELGCYGHVSGLRRTFVAPFAEEAMVPLADLVALEAIEDMDERLAALDAL
LINTCEALSSLPHLVINDDQAHRLKMGNPILVRGRDAPVAESEAYATARGKLIAIGEIGQ
GEFRPKRVFA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacccaaaggccggccgatttccggctggctgatcctcgacaag
ccggtggatttcggctcgacggaagccgtctccaagatcaagtggctctacaaggccgag
aaggccggtcatgccggcacgctcgatccgctcgcctccggcatgctgccgatcgcgctc
ggcgacgcgacgaagaccgtcccctacgtgatggacggccgcaagatctatgaattcacg
gtgagctggggcgaggaacgtgcgaccgacgatctcgagggcgaggtgaccaagagttcg
gacaaacgcccgagcgaacagcagattcgcgatattctgcctggatatatcggtaccatc
agccaggtgccgccgcagttttccgctatcaagatatccggtgagcgcgcctatgatctg
gcgcgagaaggcgaaaccgtcgaaatcccctcgcgtgaggtcgatatcttccggctgacc
ttgctcgcctgcccggacgccgatagcgcgcatttcgaagtggaatgcggcaagggtacc
tatgtcagggcgctggcgcgcgatttcggccgcgagctcggctgctacggccatgtgtcc
gggctgcggcgcaccttcgtcgcgcctttcgcggaagaggccatggtgccgcttgcggat
ctcgtggcactggaggcgatcgaggatatggacgagcgcctggcggccctcgacgcgctg
ctgatcaacacctgcgaagcgctatcctccctgccccatctggtcatcaatgacgaccag
gcgcaccggctgaagatgggcaacccgatcctggtgcgtggccgcgatgcgccggttgcc
gaaagcgaagcctatgcgacggcccgcggcaagctgatcgcgatcggcgagatcggccag
ggggagttccgcccgaagcgggttttcgcctga
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