Rhizobium indicum: FFM53_012810
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Entry
FFM53_012810 CDS
T07009
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rii
Rhizobium indicum
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rii03016
]
FFM53_012810
Enzymes [BR:
rii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FFM53_012810
Transfer RNA biogenesis [BR:
rii03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FFM53_012810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DUF2017
Motif
Other DBs
NCBI-ProteinID:
QKK17249
LinkDB
All DBs
Position
complement(2567604..2568230)
Genome browser
AA seq
208 aa
AA seq
DB search
MAATIRYHEGDISAADAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGTADIIRIAAG
QKEAPNLVALLEDPTHQKIFHYGRFDIAVLFHTFGVTATPVFCTKIASRLIRTYTDRHGL
KDNLKEMLDVDVSKAQQSSDWAAERLSPAQLEYAASDVLYLHALRDKLTERLIRDGRYDH
ATACFEFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaccatacgttatcacgaaggcgatatttccgcggccgatgccgcccgctac
accggcgcgattgccatcgacaccgaaacgctcggcctggtgccgcgccgcgatcggctc
tgcgtcgtccagctttcgccgggtgacggcaccgccgatatcatccgcatcgccgccggt
cagaaagaggcgcccaatctcgtcgccctgcttgaagaccccacccatcagaagatcttt
cattacggccgcttcgatattgccgtgctcttccataccttcggcgtcaccgcgaccccg
gttttctgcaccaagatcgcctcgcgcctgatccggacctatacggatcgccacggcctc
aaggacaatctcaaggagatgctcgacgtcgacgtctccaaggcgcagcaatcttccgat
tgggcggccgagaggctgtctccggcccagctcgaatatgccgcctccgacgtgctttat
ctgcatgcgttgcgcgataagctgacggaacggctgatccgcgacggccgctacgatcat
gcgacggcctgtttcgaattcctgccgacccgcgccaagctcgacctgctcggctgggaa
gaggccgatatcttcgcccacagctga
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